RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
CLPTM1-211ENST00000589347 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
CLPTM1-211ENST00000589347 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
CLPTM1-211ENST00000589347 HMCN1Q96RW7 5635 aa3.97□□□□□ -1.77
CLPTM1-211ENST00000589347 AHNAK2Q8IVF2 5795 aa3.96□□□□□ -1.78
CLPTM1-211ENST00000589347 KRTAP19-7Q3SYF9 63 aa3.95□□□□□ -1.78
CLPTM1-211ENST00000589347 MT1EP04732 61 aa3.94□□□□□ -1.78
CLPTM1-211ENST00000589347 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
CLPTM1-211ENST00000589347 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
CLPTM1-211ENST00000589347 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
CLPTM1-211ENST00000589347 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
CLPTM1-211ENST00000589347 TNP1P09430 55 aa3.89□□□□□ -1.79
CLPTM1-211ENST00000589347 UQCR11O14957 56 aa3.88□□□□□ -1.79
CLPTM1-211ENST00000589347 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
CLPTM1-211ENST00000589347 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
CLPTM1-211ENST00000589347 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
CLPTM1-211ENST00000589347 MT1GP13640 62 aa3.83□□□□□ -1.8
CLPTM1-211ENST00000589347 MT4P47944 62 aa3.83□□□□□ -1.8
CLPTM1-211ENST00000589347 ROMO1P60602 79 aa3.82□□□□□ -1.8
CLPTM1-211ENST00000589347 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
CLPTM1-211ENST00000589347 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
CLPTM1-211ENST00000589347 C10orf95Q9H7T3 257 aa3.81□□□□□ -1.8
CLPTM1-211ENST00000589347 KRTAP25-1Q3LHN0 102 aa3.78□□□□□ -1.8
CLPTM1-211ENST00000589347 MT1MQ8N339 61 aa3.76□□□□□ -1.81
CLPTM1-211ENST00000589347 MT1LQ93083 61 aa3.76□□□□□ -1.81
CLPTM1-211ENST00000589347 K7ERS5 55 aa3.75□□□□□ -1.81
CLPTM1-211ENST00000589347 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
CLPTM1-211ENST00000589347 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
CLPTM1-211ENST00000589347 KRTAP4-6Q9BYQ5 205 aa3.74□□□□□ -1.81
CLPTM1-211ENST00000589347 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
CLPTM1-211ENST00000589347 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
CLPTM1-211ENST00000589347 A0A0A0MQY5 61 aa3.68□□□□□ -1.82
CLPTM1-211ENST00000589347 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
CLPTM1-211ENST00000589347 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
CLPTM1-211ENST00000589347 KRTAP23-1A1A580 65 aa3.53□□□□□ -1.84
CLPTM1-211ENST00000589347 KRTAP4-7Q9BYR0 210 aa3.53□□□□□ -1.84
CLPTM1-211ENST00000589347 KRTAP19-4Q3LI73 84 aa3.52□□□□□ -1.85
CLPTM1-211ENST00000589347 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
CLPTM1-211ENST00000589347 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
CLPTM1-211ENST00000589347 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
CLPTM1-211ENST00000589347 LUZP6Q538Z0 58 aa3.48□□□□□ -1.85
CLPTM1-211ENST00000589347 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
CLPTM1-211ENST00000589347 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
CLPTM1-211ENST00000589347 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
CLPTM1-211ENST00000589347 KRTAP12-4P60329 112 aa3.4□□□□□ -1.87
CLPTM1-211ENST00000589347 MUC5ACP98088 5654 aa3.4□□□□□ -1.87
CLPTM1-211ENST00000589347 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
CLPTM1-211ENST00000589347 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
CLPTM1-211ENST00000589347 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
CLPTM1-211ENST00000589347 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
CLPTM1-211ENST00000589347 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
CLPTM1-211ENST00000589347 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
CLPTM1-211ENST00000589347 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
CLPTM1-211ENST00000589347 MT1AP04731 61 aa3.22□□□□□ -1.89
CLPTM1-211ENST00000589347 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
CLPTM1-211ENST00000589347 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
CLPTM1-211ENST00000589347 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
CLPTM1-211ENST00000589347 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
CLPTM1-211ENST00000589347 INE1O15225 51 aa3.04□□□□□ -1.92
CLPTM1-211ENST00000589347 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
CLPTM1-211ENST00000589347 MT3P25713 68 aa2.97□□□□□ -1.93
CLPTM1-211ENST00000589347 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
CLPTM1-211ENST00000589347 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
CLPTM1-211ENST00000589347 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
CLPTM1-211ENST00000589347 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
CLPTM1-211ENST00000589347 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
CLPTM1-211ENST00000589347 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
CLPTM1-211ENST00000589347 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
CLPTM1-211ENST00000589347 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
CLPTM1-211ENST00000589347 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
CLPTM1-211ENST00000589347 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
CLPTM1-211ENST00000589347 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
CLPTM1-211ENST00000589347 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
CLPTM1-211ENST00000589347 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
CLPTM1-211ENST00000589347 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
CLPTM1-211ENST00000589347 PRM1P04553 51 aa1.84□□□□□ -2.11
CLPTM1-211ENST00000589347 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
CLPTM1-211ENST00000589347 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 86.4 ms