RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-222	ENST00000589235	MT1E	P04732	61 aa		7.92	□□□□□ -1.14
CIRBP-222	ENST00000589235	KRTAP19-3	Q7Z4W3	81 aa		7.91	□□□□□ -1.14
CIRBP-222	ENST00000589235	KRTAP12-1	P59990	96 aa		7.84	□□□□□ -1.15
CIRBP-222	ENST00000589235	KRTAP19-5	Q3LI72	72 aa		7.75	□□□□□ -1.17
CIRBP-222	ENST00000589235	MT1G	P13640	62 aa		7.74	□□□□□ -1.17
CIRBP-222	ENST00000589235	PP632	Q6XCG6	107 aa		7.74	□□□□□ -1.17
CIRBP-222	ENST00000589235	DST	Q03001	7570 aa	Known RBP	7.73	□□□□□ -1.17
CIRBP-222	ENST00000589235	KRTAP4-9	Q9BYQ8	210 aa		7.66	□□□□□ -1.18
CIRBP-222	ENST00000589235	TNP1	P09430	55 aa		7.61	□□□□□ -1.19
CIRBP-222	ENST00000589235	ROMO1	P60602	79 aa		7.6	□□□□□ -1.19
CIRBP-222	ENST00000589235	MT1M	Q8N339	61 aa		7.55	□□□□□ -1.2
CIRBP-222	ENST00000589235	MT1L	Q93083	61 aa		7.55	□□□□□ -1.2
CIRBP-222	ENST00000589235	PRAC1	Q96KF2	57 aa		7.55	□□□□□ -1.2
CIRBP-222	ENST00000589235	GPR98	Q8WXG9	6306 aa		7.51	□□□□□ -1.21
CIRBP-222	ENST00000589235	LCE3A	Q5TA76	89 aa		7.51	□□□□□ -1.21
CIRBP-222	ENST00000589235	LCE4A	Q5TA78	99 aa		7.5	□□□□□ -1.21
CIRBP-222	ENST00000589235	C10orf95	Q9H7T3	257 aa		7.5	□□□□□ -1.21
CIRBP-222	ENST00000589235	LCE1D	Q5T752	114 aa		7.47	□□□□□ -1.21
CIRBP-222	ENST00000589235	KRTAP25-1	Q3LHN0	102 aa		7.41	□□□□□ -1.22
CIRBP-222	ENST00000589235	MT4	P47944	62 aa		7.39	□□□□□ -1.23
CIRBP-222	ENST00000589235	KRTAP4-3	Q9BYR4	195 aa		7.32	□□□□□ -1.24
CIRBP-222	ENST00000589235	KRTAP12-3	P60328	96 aa		7.27	□□□□□ -1.25
CIRBP-222	ENST00000589235	KRTAP5-4	Q6L8H1	288 aa		7.27	□□□□□ -1.25
CIRBP-222	ENST00000589235	HMCN1	Q96RW7	5635 aa		7.26	□□□□□ -1.25
CIRBP-222	ENST00000589235	KRTAP4-6	Q9BYQ5	205 aa		7.13	□□□□□ -1.27
CIRBP-222	ENST00000589235	KRTAP4-7	Q9BYR0	210 aa		7.12	□□□□□ -1.27
CIRBP-222	ENST00000589235	AHNAK2	Q8IVF2	5795 aa		7.01	□□□□□ -1.29
CIRBP-222	ENST00000589235	KRTAP5-10	Q6L8G5	202 aa		6.99	□□□□□ -1.29
CIRBP-222	ENST00000589235	KRTAP23-1	A1A580	65 aa		6.98	□□□□□ -1.29
CIRBP-222	ENST00000589235	KRTAP19-4	Q3LI73	84 aa		6.95	□□□□□ -1.3
CIRBP-222	ENST00000589235	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.91	□□□□□ -1.3
CIRBP-222	ENST00000589235	SPRR5	A0A1B0GTR4	108 aa		6.88	□□□□□ -1.31
CIRBP-222	ENST00000589235	KRTAP12-4	P60329	112 aa		6.88	□□□□□ -1.31
CIRBP-222	ENST00000589235	KRTAP20-2	Q3LI61	65 aa		6.88	□□□□□ -1.31
CIRBP-222	ENST00000589235	KRTAP5-3	Q6L8H2	238 aa		6.83	□□□□□ -1.32
CIRBP-222	ENST00000589235	KRTAP5-7	Q6L8G8	165 aa		6.77	□□□□□ -1.33
CIRBP-222	ENST00000589235	LOC100996750	A0A140TA64	210 aa		6.75	□□□□□ -1.33
CIRBP-222	ENST00000589235	KRTAP15-1	Q3LI76	137 aa		6.75	□□□□□ -1.33
CIRBP-222	ENST00000589235	LCE3C	Q5T5A8	94 aa		6.68	□□□□□ -1.34
CIRBP-222	ENST00000589235	SYNE1	Q8NF91	8797 aa	Known RBP	6.56	□□□□□ -1.36
CIRBP-222	ENST00000589235	MT1A	P04731	61 aa		6.44	□□□□□ -1.38
CIRBP-222	ENST00000589235	KRTAP6-1	Q3LI64	71 aa		6.37	□□□□□ -1.39
CIRBP-222	ENST00000589235	KRTAP5-2	Q701N4	177 aa		6.33	□□□□□ -1.4
CIRBP-222	ENST00000589235	KRTAP4-11	Q9BYQ6	195 aa		6.33	□□□□□ -1.4
CIRBP-222	ENST00000589235	KRTAP9-4	Q9BYQ2	154 aa		6.25	□□□□□ -1.41
CIRBP-222	ENST00000589235	LUZP6	Q538Z0	58 aa		6.2	□□□□□ -1.42
CIRBP-222	ENST00000589235	KRTAP9-6	A8MVA2	160 aa		6.19	□□□□□ -1.42
CIRBP-222	ENST00000589235	NDUFAF8	A1L188	74 aa		6.16	□□□□□ -1.42
CIRBP-222	ENST00000589235	KRTAP6-2	Q3LI66	62 aa		6.13	□□□□□ -1.43
CIRBP-222	ENST00000589235	KRTAP5-8	O75690	187 aa		6.09	□□□□□ -1.43
CIRBP-222	ENST00000589235	MT3	P25713	68 aa		5.95	□□□□□ -1.46
CIRBP-222	ENST00000589235	KRTAP9-9	Q9BYP9	154 aa		5.88	□□□□□ -1.47
CIRBP-222	ENST00000589235	OBSCN	Q5VST9	7968 aa		5.84	□□□□□ -1.47
CIRBP-222	ENST00000589235	MUC5AC	P98088	5654 aa		5.83	□□□□□ -1.48
CIRBP-222	ENST00000589235		H3BS24	57 aa		5.83	□□□□□ -1.48
CIRBP-222	ENST00000589235	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.81	□□□□□ -1.48
CIRBP-222	ENST00000589235	AHNAK	Q09666	5890 aa	Known RBP	5.81	□□□□□ -1.48
CIRBP-222	ENST00000589235	KRTAP5-1	Q6L8H4	278 aa		5.7	□□□□□ -1.5
CIRBP-222	ENST00000589235		A0A0A0MQY5	61 aa		5.57	□□□□□ -1.52
CIRBP-222	ENST00000589235	LCE1E	Q5T753	118 aa		5.49	□□□□□ -1.53
CIRBP-222	ENST00000589235	INE1	O15225	51 aa		5.22	□□□□□ -1.57
CIRBP-222	ENST00000589235	LCE1B	Q5T7P3	118 aa		5.16	□□□□□ -1.58
CIRBP-222	ENST00000589235	KRTAP4-2	Q9BYR5	136 aa		5.11	□□□□□ -1.59
CIRBP-222	ENST00000589235	LCE1C	Q5T751	118 aa		5.08	□□□□□ -1.6
CIRBP-222	ENST00000589235	LCE3D	Q9BYE3	92 aa		4.81	□□□□□ -1.64
CIRBP-222	ENST00000589235	KRTAP4-12	Q9BQ66	201 aa		4.69	□□□□□ -1.66
CIRBP-222	ENST00000589235	KRTAP5-11	Q6L8G4	156 aa		4.59	□□□□□ -1.67
CIRBP-222	ENST00000589235	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.58	□□□□□ -1.68
CIRBP-222	ENST00000589235	LCE1F	Q5T754	118 aa		4.55	□□□□□ -1.68
CIRBP-222	ENST00000589235	LCE3E	Q5T5B0	92 aa		4.5	□□□□□ -1.69
CIRBP-222	ENST00000589235	KRTAP21-2	Q3LI59	83 aa		4.19	□□□□□ -1.74
CIRBP-222	ENST00000589235	PHGR1	C9JFL3	82 aa		4.12	□□□□□ -1.75
CIRBP-222	ENST00000589235	PRM1	P04553	51 aa		3.94	□□□□□ -1.78
CIRBP-222	ENST00000589235	KRTAP4-4	Q9BYR3	166 aa		3.85	□□□□□ -1.79
CIRBP-222	ENST00000589235	MUC19	Q7Z5P9	8384 aa		3.58	□□□□□ -1.84
CIRBP-222	ENST00000589235	KRTAP21-1	Q3LI58	79 aa		3.16	□□□□□ -1.9
CIRBP-222	ENST00000589235	MUC16	Q8WXI7	14507 aa		2.57	□□□□□ -2

Retrieved 77 of 20,778 RNA–protein pairs in 19.2 ms