RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 CDC42SE1Q9NRR8 79 aa5.2□□□□□ -1.58
CLPTM1-210ENST00000589158 KRTAP19-3Q7Z4W3 81 aa5.17□□□□□ -1.58
CLPTM1-210ENST00000589158 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
CLPTM1-210ENST00000589158 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
CLPTM1-210ENST00000589158 BRK1Q8WUW1 75 aa5.08□□□□□ -1.6
CLPTM1-210ENST00000589158 MT1GP13640 62 aa5.07□□□□□ -1.6
CLPTM1-210ENST00000589158 K7ERS5 55 aa5.06□□□□□ -1.6
CLPTM1-210ENST00000589158 DSTQ03001 7570 aaKnown RBP5.04□□□□□ -1.6
CLPTM1-210ENST00000589158 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
CLPTM1-210ENST00000589158 MT1LQ93083 61 aa5.02□□□□□ -1.61
CLPTM1-210ENST00000589158 MT1MQ8N339 61 aa4.98□□□□□ -1.61
CLPTM1-210ENST00000589158 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
CLPTM1-210ENST00000589158 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
CLPTM1-210ENST00000589158 ROMO1P60602 79 aa4.89□□□□□ -1.63
CLPTM1-210ENST00000589158 KRTAP4-3Q9BYR4 195 aa4.87□□□□□ -1.63
CLPTM1-210ENST00000589158 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
CLPTM1-210ENST00000589158 PRO0628Q9UI54 55 aa4.84□□□□□ -1.63
CLPTM1-210ENST00000589158 KRTAP4-7Q9BYR0 210 aa4.8□□□□□ -1.64
CLPTM1-210ENST00000589158 PMAIP1Q13794 54 aa4.77□□□□□ -1.65
CLPTM1-210ENST00000589158 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
CLPTM1-210ENST00000589158 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
CLPTM1-210ENST00000589158 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
CLPTM1-210ENST00000589158 MT4P47944 62 aa4.71□□□□□ -1.66
CLPTM1-210ENST00000589158 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
CLPTM1-210ENST00000589158 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.67
CLPTM1-210ENST00000589158 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
CLPTM1-210ENST00000589158 GPR98Q8WXG9 6306 aa4.63□□□□□ -1.67
CLPTM1-210ENST00000589158 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
CLPTM1-210ENST00000589158 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
CLPTM1-210ENST00000589158 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
CLPTM1-210ENST00000589158 KRTAP5-5Q701N2 237 aaPredicted RBP4.53□□□□□ -1.68
CLPTM1-210ENST00000589158 KTN1-AS1Q86SY8 53 aa4.52□□□□□ -1.69
CLPTM1-210ENST00000589158 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
CLPTM1-210ENST00000589158 KRTAP9-4Q9BYQ2 154 aa4.44□□□□□ -1.7
CLPTM1-210ENST00000589158 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
CLPTM1-210ENST00000589158 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
CLPTM1-210ENST00000589158 KRTAP20-2Q3LI61 65 aa4.41□□□□□ -1.7
CLPTM1-210ENST00000589158 KRTAP4-12Q9BQ66 201 aa4.41□□□□□ -1.7
CLPTM1-210ENST00000589158 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
CLPTM1-210ENST00000589158 SYNE1Q8NF91 8797 aaKnown RBP4.4□□□□□ -1.71
CLPTM1-210ENST00000589158 KRTAP5-10Q6L8G5 202 aa4.32□□□□□ -1.72
CLPTM1-210ENST00000589158 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
CLPTM1-210ENST00000589158 MT1AP04731 61 aa4.27□□□□□ -1.73
CLPTM1-210ENST00000589158 KRTAP5-3Q6L8H2 238 aa4.26□□□□□ -1.73
CLPTM1-210ENST00000589158 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
CLPTM1-210ENST00000589158 SVIPQ8NHG7 77 aa4.24□□□□□ -1.73
CLPTM1-210ENST00000589158 KRTAP5-7Q6L8G8 165 aa4.13□□□□□ -1.75
CLPTM1-210ENST00000589158 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
CLPTM1-210ENST00000589158 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
CLPTM1-210ENST00000589158 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
CLPTM1-210ENST00000589158 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
CLPTM1-210ENST00000589158 MT3P25713 68 aa3.92□□□□□ -1.78
CLPTM1-210ENST00000589158 KRTAP5-8O75690 187 aa3.86□□□□□ -1.79
CLPTM1-210ENST00000589158 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
CLPTM1-210ENST00000589158 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
CLPTM1-210ENST00000589158 LUZP6Q538Z0 58 aa3.65□□□□□ -1.83
CLPTM1-210ENST00000589158 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
CLPTM1-210ENST00000589158 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
CLPTM1-210ENST00000589158 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
CLPTM1-210ENST00000589158 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
CLPTM1-210ENST00000589158 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
CLPTM1-210ENST00000589158 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
CLPTM1-210ENST00000589158 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
CLPTM1-210ENST00000589158 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
CLPTM1-210ENST00000589158 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
CLPTM1-210ENST00000589158 H3BS24 57 aa2.99□□□□□ -1.93
CLPTM1-210ENST00000589158 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
CLPTM1-210ENST00000589158 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
CLPTM1-210ENST00000589158 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
CLPTM1-210ENST00000589158 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
CLPTM1-210ENST00000589158 INE1O15225 51 aa2.81□□□□□ -1.96
CLPTM1-210ENST00000589158 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
CLPTM1-210ENST00000589158 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
CLPTM1-210ENST00000589158 PHGR1C9JFL3 82 aa2.56□□□□□ -2
CLPTM1-210ENST00000589158 PRM1P04553 51 aa2.55□□□□□ -2
CLPTM1-210ENST00000589158 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
CLPTM1-210ENST00000589158 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
CLPTM1-210ENST00000589158 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 6.6 ms