RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 PRO2289Q9P1D8 64 aa3.67□□□□□ -1.82
KDM4B-207ENST00000588961 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
KDM4B-207ENST00000588961 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
KDM4B-207ENST00000588961 MACF1Q9UPN3 7388 aaKnown RBP3.55□□□□□ -1.84
KDM4B-207ENST00000588961 MT1XP80297 61 aa3.55□□□□□ -1.84
KDM4B-207ENST00000588961 MT3P25713 68 aa3.51□□□□□ -1.85
KDM4B-207ENST00000588961 KRTAP8-1Q8IUC2 63 aa3.48□□□□□ -1.85
KDM4B-207ENST00000588961 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
KDM4B-207ENST00000588961 KRTAP6-3Q3LI67 103 aa3.47□□□□□ -1.85
KDM4B-207ENST00000588961 KRTAP10-7P60409 375 aaPredicted RBP3.43□□□□□ -1.86
KDM4B-207ENST00000588961 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
KDM4B-207ENST00000588961 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
KDM4B-207ENST00000588961 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
KDM4B-207ENST00000588961 KMT2DO14686 5537 aa3.39□□□□□ -1.87
KDM4B-207ENST00000588961 KRTAP10-12P60413 245 aa3.39□□□□□ -1.87
KDM4B-207ENST00000588961 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
KDM4B-207ENST00000588961 NDUFAF8A1L188 74 aa3.33□□□□□ -1.88
KDM4B-207ENST00000588961 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
KDM4B-207ENST00000588961 SPRR2FQ96RM1 72 aa3.33□□□□□ -1.88
KDM4B-207ENST00000588961 MUC12Q9UKN1 5478 aa3.31□□□□□ -1.88
KDM4B-207ENST00000588961 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
KDM4B-207ENST00000588961 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
KDM4B-207ENST00000588961 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
KDM4B-207ENST00000588961 SPRR2EP22531 72 aa3.25□□□□□ -1.89
KDM4B-207ENST00000588961 SPRR2BP35325 72 aa3.25□□□□□ -1.89
KDM4B-207ENST00000588961 SPRR2AP35326 72 aa3.25□□□□□ -1.89
KDM4B-207ENST00000588961 NEBP20929 6669 aa3.25□□□□□ -1.89
KDM4B-207ENST00000588961 MDN1Q9NU22 5596 aa3.24□□□□□ -1.89
KDM4B-207ENST00000588961 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
KDM4B-207ENST00000588961 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
KDM4B-207ENST00000588961 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
KDM4B-207ENST00000588961 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
KDM4B-207ENST00000588961 SPRR2DP22532 72 aa3.14□□□□□ -1.91
KDM4B-207ENST00000588961 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
KDM4B-207ENST00000588961 MT1EP04732 61 aa3.13□□□□□ -1.91
KDM4B-207ENST00000588961 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
KDM4B-207ENST00000588961 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
KDM4B-207ENST00000588961 KRTAP19-3Q7Z4W3 81 aa3.07□□□□□ -1.92
KDM4B-207ENST00000588961 MT1GP13640 62 aa3.03□□□□□ -1.92
KDM4B-207ENST00000588961 MT1LQ93083 61 aa3.03□□□□□ -1.92
KDM4B-207ENST00000588961 KRTAP2-1Q9BYU5 128 aa3.02□□□□□ -1.93
KDM4B-207ENST00000588961 MT1MQ8N339 61 aa2.98□□□□□ -1.93
KDM4B-207ENST00000588961 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
KDM4B-207ENST00000588961 INE1O15225 51 aa2.94□□□□□ -1.94
KDM4B-207ENST00000588961 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
KDM4B-207ENST00000588961 DSTQ03001 7570 aaKnown RBP2.93□□□□□ -1.94
KDM4B-207ENST00000588961 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
KDM4B-207ENST00000588961 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
KDM4B-207ENST00000588961 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
KDM4B-207ENST00000588961 MT4P47944 62 aa2.75□□□□□ -1.97
KDM4B-207ENST00000588961 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
KDM4B-207ENST00000588961 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
KDM4B-207ENST00000588961 KRTAP12-4P60329 112 aa2.65□□□□□ -1.99
KDM4B-207ENST00000588961 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
KDM4B-207ENST00000588961 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
KDM4B-207ENST00000588961 MT1AP04731 61 aa2.61□□□□□ -1.99
KDM4B-207ENST00000588961 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
KDM4B-207ENST00000588961 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
KDM4B-207ENST00000588961 KRTAP6-1Q3LI64 71 aa2.56□□□□□ -2
KDM4B-207ENST00000588961 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
KDM4B-207ENST00000588961 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
KDM4B-207ENST00000588961 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
KDM4B-207ENST00000588961 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
KDM4B-207ENST00000588961 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
KDM4B-207ENST00000588961 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
KDM4B-207ENST00000588961 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
KDM4B-207ENST00000588961 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
KDM4B-207ENST00000588961 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
KDM4B-207ENST00000588961 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
KDM4B-207ENST00000588961 PRM1P04553 51 aa2.07□□□□□ -2.08
KDM4B-207ENST00000588961 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
KDM4B-207ENST00000588961 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
KDM4B-207ENST00000588961 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
KDM4B-207ENST00000588961 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
KDM4B-207ENST00000588961 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
KDM4B-207ENST00000588961 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
KDM4B-207ENST00000588961 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
KDM4B-207ENST00000588961 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms