RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 KRTAP2-1Q9BYU5 128 aa7.29□□□□□ -1.24
DDX39A-207ENST00000588542 LCE3BQ5TA77 95 aa7.28□□□□□ -1.24
DDX39A-207ENST00000588542 KRTAP25-1Q3LHN0 102 aa7.27□□□□□ -1.25
DDX39A-207ENST00000588542 MT1LQ93083 61 aa7.23□□□□□ -1.25
DDX39A-207ENST00000588542 MT1GP13640 62 aa7.22□□□□□ -1.25
DDX39A-207ENST00000588542 CDC42SE1Q9NRR8 79 aa7.18□□□□□ -1.26
DDX39A-207ENST00000588542 DSTQ03001 7570 aaKnown RBP7.14□□□□□ -1.27
DDX39A-207ENST00000588542 KRTAP12-3P60328 96 aa7.14□□□□□ -1.27
DDX39A-207ENST00000588542 PP632Q6XCG6 107 aa7.12□□□□□ -1.27
DDX39A-207ENST00000588542 MT1MQ8N339 61 aa7.12□□□□□ -1.27
DDX39A-207ENST00000588542 KRTAP23-1A1A580 65 aa7.03□□□□□ -1.28
DDX39A-207ENST00000588542 ROMO1P60602 79 aa7.02□□□□□ -1.29
DDX39A-207ENST00000588542 KRTAP4-3Q9BYR4 195 aa6.96□□□□□ -1.3
DDX39A-207ENST00000588542 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.3
DDX39A-207ENST00000588542 KRTAP15-1Q3LI76 137 aa6.78□□□□□ -1.32
DDX39A-207ENST00000588542 KRTAP19-4Q3LI73 84 aa6.74□□□□□ -1.33
DDX39A-207ENST00000588542 BRK1Q8WUW1 75 aa6.7□□□□□ -1.34
DDX39A-207ENST00000588542 KRTAP4-9Q9BYQ8 210 aa6.7□□□□□ -1.34
DDX39A-207ENST00000588542 LCE4AQ5TA78 99 aa6.65□□□□□ -1.34
DDX39A-207ENST00000588542 GPR98Q8WXG9 6306 aa6.65□□□□□ -1.35
DDX39A-207ENST00000588542 LCE3CQ5T5A8 94 aa6.62□□□□□ -1.35
DDX39A-207ENST00000588542 KRTAP5-4Q6L8H1 288 aa6.62□□□□□ -1.35
DDX39A-207ENST00000588542 LCE1DQ5T752 114 aa6.59□□□□□ -1.35
DDX39A-207ENST00000588542 MT4P47944 62 aa6.54□□□□□ -1.36
DDX39A-207ENST00000588542 LOC100996750A0A140TA64 210 aa6.52□□□□□ -1.37
DDX39A-207ENST00000588542 KRTAP5-5Q701N2 237 aaPredicted RBP6.52□□□□□ -1.37
DDX39A-207ENST00000588542 HMCN1Q96RW7 5635 aa6.51□□□□□ -1.37
DDX39A-207ENST00000588542 KRTAP4-6Q9BYQ5 205 aa6.42□□□□□ -1.38
DDX39A-207ENST00000588542 PMAIP1Q13794 54 aa6.31□□□□□ -1.4
DDX39A-207ENST00000588542 KRTAP9-6A8MVA2 160 aa6.29□□□□□ -1.4
DDX39A-207ENST00000588542 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
DDX39A-207ENST00000588542 KRTAP20-2Q3LI61 65 aa6.22□□□□□ -1.41
DDX39A-207ENST00000588542 SPRR5A0A1B0GTR4 108 aa6.21□□□□□ -1.42
DDX39A-207ENST00000588542 KRTAP12-4P60329 112 aa6.21□□□□□ -1.42
DDX39A-207ENST00000588542 AHNAK2Q8IVF2 5795 aa6.17□□□□□ -1.42
DDX39A-207ENST00000588542 MT1AP04731 61 aa6.14□□□□□ -1.43
DDX39A-207ENST00000588542 KRTAP6-1Q3LI64 71 aa6.1□□□□□ -1.43
DDX39A-207ENST00000588542 PRO0628Q9UI54 55 aa6.09□□□□□ -1.43
DDX39A-207ENST00000588542 PRAC1Q96KF2 57 aa6.05□□□□□ -1.44
DDX39A-207ENST00000588542 KRTAP5-3Q6L8H2 238 aa6.04□□□□□ -1.44
DDX39A-207ENST00000588542 KRTAP5-10Q6L8G5 202 aa5.97□□□□□ -1.45
DDX39A-207ENST00000588542 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.46
DDX39A-207ENST00000588542 KRTAP5-2Q701N4 177 aa5.87□□□□□ -1.47
DDX39A-207ENST00000588542 KRTAP6-2Q3LI66 62 aa5.76□□□□□ -1.49
DDX39A-207ENST00000588542 KTN1-AS1Q86SY8 53 aa5.76□□□□□ -1.49
DDX39A-207ENST00000588542 KRTAP5-7Q6L8G8 165 aa5.73□□□□□ -1.49
DDX39A-207ENST00000588542 MT3P25713 68 aa5.59□□□□□ -1.51
DDX39A-207ENST00000588542 KRTAP4-11Q9BYQ6 195 aa5.59□□□□□ -1.51
DDX39A-207ENST00000588542 SVIPQ8NHG7 77 aa5.45□□□□□ -1.54
DDX39A-207ENST00000588542 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
DDX39A-207ENST00000588542 KRTAP5-8O75690 187 aa5.42□□□□□ -1.54
DDX39A-207ENST00000588542 KRTAP5-1Q6L8H4 278 aa5.2□□□□□ -1.58
DDX39A-207ENST00000588542 MUC5ACP98088 5654 aa5.12□□□□□ -1.59
DDX39A-207ENST00000588542 LCE1EQ5T753 118 aa5.07□□□□□ -1.6
DDX39A-207ENST00000588542 AHNAKQ09666 5890 aaKnown RBP5.05□□□□□ -1.6
DDX39A-207ENST00000588542 MUC5BQ9HC84 5762 aaPredicted RBP5.04□□□□□ -1.6
DDX39A-207ENST00000588542 KRTAP9-9Q9BYP9 154 aa5.03□□□□□ -1.6
DDX39A-207ENST00000588542 LUZP6Q538Z0 58 aa4.99□□□□□ -1.61
DDX39A-207ENST00000588542 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
DDX39A-207ENST00000588542 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
DDX39A-207ENST00000588542 LCE1BQ5T7P3 118 aa4.73□□□□□ -1.65
DDX39A-207ENST00000588542 LCE1CQ5T751 118 aa4.71□□□□□ -1.66
DDX39A-207ENST00000588542 LCE3EQ5T5B0 92 aa4.58□□□□□ -1.68
DDX39A-207ENST00000588542 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
DDX39A-207ENST00000588542 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
DDX39A-207ENST00000588542 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
DDX39A-207ENST00000588542 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
DDX39A-207ENST00000588542 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
DDX39A-207ENST00000588542 KRTAP21-2Q3LI59 83 aa4.03□□□□□ -1.76
DDX39A-207ENST00000588542 PHGR1C9JFL3 82 aa3.65□□□□□ -1.83
DDX39A-207ENST00000588542 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
DDX39A-207ENST00000588542 PRM1P04553 51 aa3.62□□□□□ -1.83
DDX39A-207ENST00000588542 INE1O15225 51 aa3.48□□□□□ -1.85
DDX39A-207ENST00000588542 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
DDX39A-207ENST00000588542 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
DDX39A-207ENST00000588542 H3BS24 57 aa2.79□□□□□ -1.96
DDX39A-207ENST00000588542 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
DDX39A-207ENST00000588542 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 86.7 ms