RNA–Protein interactions for RNA: ENST00000588352.5

GHDC-208, Transcript of GH3 domain containing, humanhuman

TSL 5

Gene GHDC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-208ENST00000588352 KRTAP2-2Q9BYT5 123 aa6.18□□□□□ -1.42
GHDC-208ENST00000588352 KRTAP2-1Q9BYU5 128 aa6.18□□□□□ -1.42
GHDC-208ENST00000588352 LCE3BQ5TA77 95 aa6.17□□□□□ -1.42
GHDC-208ENST00000588352 MT1GP13640 62 aa6.12□□□□□ -1.43
GHDC-208ENST00000588352 MT1LQ93083 61 aa6.1□□□□□ -1.43
GHDC-208ENST00000588352 PP632Q6XCG6 107 aa6.09□□□□□ -1.43
GHDC-208ENST00000588352 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
GHDC-208ENST00000588352 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
GHDC-208ENST00000588352 MT1MQ8N339 61 aa6.02□□□□□ -1.45
GHDC-208ENST00000588352 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
GHDC-208ENST00000588352 ROMO1P60602 79 aa5.95□□□□□ -1.46
GHDC-208ENST00000588352 DSTQ03001 7570 aaKnown RBP5.91□□□□□ -1.46
GHDC-208ENST00000588352 KRTAP4-3Q9BYR4 195 aa5.81□□□□□ -1.48
GHDC-208ENST00000588352 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
GHDC-208ENST00000588352 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
GHDC-208ENST00000588352 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
GHDC-208ENST00000588352 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
GHDC-208ENST00000588352 BRK1Q8WUW1 75 aa5.66□□□□□ -1.5
GHDC-208ENST00000588352 KRTAP5-4Q6L8H1 288 aa5.63□□□□□ -1.51
GHDC-208ENST00000588352 KRTAP4-9Q9BYQ8 210 aa5.62□□□□□ -1.51
GHDC-208ENST00000588352 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.51
GHDC-208ENST00000588352 LCE1DQ5T752 114 aa5.58□□□□□ -1.52
GHDC-208ENST00000588352 KRTAP5-5Q701N2 237 aaPredicted RBP5.53□□□□□ -1.52
GHDC-208ENST00000588352 MT4P47944 62 aa5.51□□□□□ -1.53
GHDC-208ENST00000588352 HMCN1Q96RW7 5635 aa5.49□□□□□ -1.53
GHDC-208ENST00000588352 LOC100996750A0A140TA64 210 aa5.44□□□□□ -1.54
GHDC-208ENST00000588352 KRTAP4-6Q9BYQ5 205 aa5.39□□□□□ -1.55
GHDC-208ENST00000588352 PMAIP1Q13794 54 aa5.32□□□□□ -1.56
GHDC-208ENST00000588352 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
GHDC-208ENST00000588352 GPR98Q8WXG9 6306 aa5.3□□□□□ -1.56
GHDC-208ENST00000588352 KRTAP12-4P60329 112 aa5.29□□□□□ -1.56
GHDC-208ENST00000588352 KRTAP20-2Q3LI61 65 aa5.27□□□□□ -1.57
GHDC-208ENST00000588352 KRTAP9-6A8MVA2 160 aa5.26□□□□□ -1.57
GHDC-208ENST00000588352 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
GHDC-208ENST00000588352 MT1AP04731 61 aa5.21□□□□□ -1.58
GHDC-208ENST00000588352 AHNAK2Q8IVF2 5795 aa5.19□□□□□ -1.58
GHDC-208ENST00000588352 PRO0628Q9UI54 55 aa5.16□□□□□ -1.58
GHDC-208ENST00000588352 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
GHDC-208ENST00000588352 KRTAP5-3Q6L8H2 238 aa5.11□□□□□ -1.59
GHDC-208ENST00000588352 KRTAP5-10Q6L8G5 202 aa5.07□□□□□ -1.6
GHDC-208ENST00000588352 PRAC1Q96KF2 57 aa5.06□□□□□ -1.6
GHDC-208ENST00000588352 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
GHDC-208ENST00000588352 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
GHDC-208ENST00000588352 KTN1-AS1Q86SY8 53 aa4.9□□□□□ -1.63
GHDC-208ENST00000588352 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
GHDC-208ENST00000588352 KRTAP5-7Q6L8G8 165 aa4.85□□□□□ -1.63
GHDC-208ENST00000588352 MT3P25713 68 aa4.75□□□□□ -1.65
GHDC-208ENST00000588352 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
GHDC-208ENST00000588352 SVIPQ8NHG7 77 aa4.63□□□□□ -1.67
GHDC-208ENST00000588352 KRTAP5-8O75690 187 aa4.58□□□□□ -1.68
GHDC-208ENST00000588352 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
GHDC-208ENST00000588352 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
GHDC-208ENST00000588352 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
GHDC-208ENST00000588352 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
GHDC-208ENST00000588352 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
GHDC-208ENST00000588352 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
GHDC-208ENST00000588352 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
GHDC-208ENST00000588352 AHNAKQ09666 5890 aaKnown RBP4.21□□□□□ -1.74
GHDC-208ENST00000588352 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
GHDC-208ENST00000588352 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
GHDC-208ENST00000588352 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
GHDC-208ENST00000588352 LCE1BQ5T7P3 118 aa4.01□□□□□ -1.77
GHDC-208ENST00000588352 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
GHDC-208ENST00000588352 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
GHDC-208ENST00000588352 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
GHDC-208ENST00000588352 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
GHDC-208ENST00000588352 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
GHDC-208ENST00000588352 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
GHDC-208ENST00000588352 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
GHDC-208ENST00000588352 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
GHDC-208ENST00000588352 PRM1P04553 51 aa3.04□□□□□ -1.92
GHDC-208ENST00000588352 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
GHDC-208ENST00000588352 A0A0A0MQY5 61 aa2.98□□□□□ -1.93
GHDC-208ENST00000588352 INE1O15225 51 aa2.98□□□□□ -1.93
GHDC-208ENST00000588352 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
GHDC-208ENST00000588352 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
GHDC-208ENST00000588352 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
GHDC-208ENST00000588352 H3BS24 57 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms