RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 SPRR2FQ96RM1 72 aa3.49□□□□□ -1.85
CIRBP-218ENST00000588344 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
CIRBP-218ENST00000588344 NEBP20929 6669 aa3.48□□□□□ -1.85
CIRBP-218ENST00000588344 KRTAP25-1Q3LHN0 102 aa3.46□□□□□ -1.86
CIRBP-218ENST00000588344 KRTAP23-1A1A580 65 aa3.39□□□□□ -1.87
CIRBP-218ENST00000588344 SPRR2EP22531 72 aa3.39□□□□□ -1.87
CIRBP-218ENST00000588344 SPRR2BP35325 72 aa3.39□□□□□ -1.87
CIRBP-218ENST00000588344 SPRR2AP35326 72 aa3.39□□□□□ -1.87
CIRBP-218ENST00000588344 ROMO1P60602 79 aa3.39□□□□□ -1.87
CIRBP-218ENST00000588344 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
CIRBP-218ENST00000588344 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
CIRBP-218ENST00000588344 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
CIRBP-218ENST00000588344 BRK1Q8WUW1 75 aa3.35□□□□□ -1.87
CIRBP-218ENST00000588344 MT1EP04732 61 aa3.34□□□□□ -1.87
CIRBP-218ENST00000588344 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.87
CIRBP-218ENST00000588344 PP632Q6XCG6 107 aa3.31□□□□□ -1.88
CIRBP-218ENST00000588344 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
CIRBP-218ENST00000588344 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
CIRBP-218ENST00000588344 SPRR2DP22532 72 aa3.28□□□□□ -1.88
CIRBP-218ENST00000588344 KRTAP2-3P0C7H8 128 aa3.27□□□□□ -1.89
CIRBP-218ENST00000588344 MT1GP13640 62 aa3.27□□□□□ -1.89
CIRBP-218ENST00000588344 KRTAP2-4Q9BYR9 128 aa3.27□□□□□ -1.89
CIRBP-218ENST00000588344 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
CIRBP-218ENST00000588344 MT1LQ93083 61 aa3.23□□□□□ -1.89
CIRBP-218ENST00000588344 PMAIP1Q13794 54 aa3.2□□□□□ -1.9
CIRBP-218ENST00000588344 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
CIRBP-218ENST00000588344 KRTAP2-1Q9BYU5 128 aa3.19□□□□□ -1.9
CIRBP-218ENST00000588344 KRTAP15-1Q3LI76 137 aa3.16□□□□□ -1.9
CIRBP-218ENST00000588344 MT1MQ8N339 61 aa3.16□□□□□ -1.9
CIRBP-218ENST00000588344 DSTQ03001 7570 aaKnown RBP3.15□□□□□ -1.9
CIRBP-218ENST00000588344 PRO0628Q9UI54 55 aa3.15□□□□□ -1.91
CIRBP-218ENST00000588344 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
CIRBP-218ENST00000588344 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
CIRBP-218ENST00000588344 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
CIRBP-218ENST00000588344 KTN1-AS1Q86SY8 53 aa2.95□□□□□ -1.94
CIRBP-218ENST00000588344 PRAC1Q96KF2 57 aa2.94□□□□□ -1.94
CIRBP-218ENST00000588344 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
CIRBP-218ENST00000588344 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
CIRBP-218ENST00000588344 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
CIRBP-218ENST00000588344 MT4P47944 62 aa2.83□□□□□ -1.96
CIRBP-218ENST00000588344 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
CIRBP-218ENST00000588344 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
CIRBP-218ENST00000588344 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
CIRBP-218ENST00000588344 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
CIRBP-218ENST00000588344 MT1AP04731 61 aa2.77□□□□□ -1.97
CIRBP-218ENST00000588344 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
CIRBP-218ENST00000588344 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
CIRBP-218ENST00000588344 KRTAP6-1Q3LI64 71 aa2.7□□□□□ -1.98
CIRBP-218ENST00000588344 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
CIRBP-218ENST00000588344 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
CIRBP-218ENST00000588344 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
CIRBP-218ENST00000588344 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
CIRBP-218ENST00000588344 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
CIRBP-218ENST00000588344 LUZP6Q538Z0 58 aa2.57□□□□□ -2
CIRBP-218ENST00000588344 MT3P25713 68 aa2.56□□□□□ -2
CIRBP-218ENST00000588344 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
CIRBP-218ENST00000588344 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
CIRBP-218ENST00000588344 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
CIRBP-218ENST00000588344 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
CIRBP-218ENST00000588344 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
CIRBP-218ENST00000588344 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
CIRBP-218ENST00000588344 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
CIRBP-218ENST00000588344 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
CIRBP-218ENST00000588344 NDUFAF8A1L188 74 aa2.23□□□□□ -2.05
CIRBP-218ENST00000588344 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
CIRBP-218ENST00000588344 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
CIRBP-218ENST00000588344 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
CIRBP-218ENST00000588344 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
CIRBP-218ENST00000588344 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
CIRBP-218ENST00000588344 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
CIRBP-218ENST00000588344 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
CIRBP-218ENST00000588344 INE1O15225 51 aa1.89□□□□□ -2.11
CIRBP-218ENST00000588344 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
CIRBP-218ENST00000588344 PRM1P04553 51 aa1.72□□□□□ -2.13
CIRBP-218ENST00000588344 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
CIRBP-218ENST00000588344 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
CIRBP-218ENST00000588344 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
CIRBP-218ENST00000588344 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 28.6 ms