RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 LCE1DQ5T752 114 aa5.91□□□□□ -1.46
NCLN-203ENST00000587740 KRTAP19-7Q3SYF9 63 aa5.84□□□□□ -1.47
NCLN-203ENST00000587740 KRTAP19-3Q7Z4W3 81 aa5.83□□□□□ -1.48
NCLN-203ENST00000587740 HMCN1Q96RW7 5635 aa5.82□□□□□ -1.48
NCLN-203ENST00000587740 MT1EP04732 61 aa5.79□□□□□ -1.48
NCLN-203ENST00000587740 AHNAK2Q8IVF2 5795 aa5.79□□□□□ -1.48
NCLN-203ENST00000587740 MT4P47944 62 aa5.77□□□□□ -1.49
NCLN-203ENST00000587740 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
NCLN-203ENST00000587740 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
NCLN-203ENST00000587740 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
NCLN-203ENST00000587740 KRTAP5-10Q6L8G5 202 aa5.74□□□□□ -1.49
NCLN-203ENST00000587740 KRTAP25-1Q3LHN0 102 aa5.73□□□□□ -1.49
NCLN-203ENST00000587740 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
NCLN-203ENST00000587740 MT1GP13640 62 aa5.62□□□□□ -1.51
NCLN-203ENST00000587740 ROMO1P60602 79 aa5.59□□□□□ -1.51
NCLN-203ENST00000587740 KRTAP5-4Q6L8H1 288 aa5.59□□□□□ -1.51
NCLN-203ENST00000587740 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
NCLN-203ENST00000587740 KRTAP5-7Q6L8G8 165 aa5.57□□□□□ -1.52
NCLN-203ENST00000587740 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
NCLN-203ENST00000587740 MT1MQ8N339 61 aa5.55□□□□□ -1.52
NCLN-203ENST00000587740 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
NCLN-203ENST00000587740 PP632Q6XCG6 107 aa5.53□□□□□ -1.52
NCLN-203ENST00000587740 MT1LQ93083 61 aa5.53□□□□□ -1.52
NCLN-203ENST00000587740 KRTAP5-3Q6L8H2 238 aa5.49□□□□□ -1.53
NCLN-203ENST00000587740 BRK1Q8WUW1 75 aa5.48□□□□□ -1.53
NCLN-203ENST00000587740 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
NCLN-203ENST00000587740 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
NCLN-203ENST00000587740 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
NCLN-203ENST00000587740 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
NCLN-203ENST00000587740 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
NCLN-203ENST00000587740 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
NCLN-203ENST00000587740 PMAIP1Q13794 54 aa5.16□□□□□ -1.58
NCLN-203ENST00000587740 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.59
NCLN-203ENST00000587740 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
NCLN-203ENST00000587740 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
NCLN-203ENST00000587740 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
NCLN-203ENST00000587740 PRO0628Q9UI54 55 aa5.02□□□□□ -1.61
NCLN-203ENST00000587740 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
NCLN-203ENST00000587740 KRTAP4-11Q9BYQ6 195 aa4.95□□□□□ -1.62
NCLN-203ENST00000587740 PRAC1Q96KF2 57 aa4.88□□□□□ -1.63
NCLN-203ENST00000587740 AHNAKQ09666 5890 aaKnown RBP4.84□□□□□ -1.63
NCLN-203ENST00000587740 MUC5ACP98088 5654 aa4.83□□□□□ -1.64
NCLN-203ENST00000587740 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
NCLN-203ENST00000587740 KRTAP5-8O75690 187 aa4.82□□□□□ -1.64
NCLN-203ENST00000587740 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
NCLN-203ENST00000587740 KRTAP5-2Q701N4 177 aa4.81□□□□□ -1.64
NCLN-203ENST00000587740 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
NCLN-203ENST00000587740 MT1AP04731 61 aa4.72□□□□□ -1.65
NCLN-203ENST00000587740 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
NCLN-203ENST00000587740 KRTAP6-1Q3LI64 71 aa4.67□□□□□ -1.66
NCLN-203ENST00000587740 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.67
NCLN-203ENST00000587740 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
NCLN-203ENST00000587740 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
NCLN-203ENST00000587740 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
NCLN-203ENST00000587740 KRTAP5-1Q6L8H4 278 aa4.42□□□□□ -1.7
NCLN-203ENST00000587740 MT3P25713 68 aa4.32□□□□□ -1.72
NCLN-203ENST00000587740 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
NCLN-203ENST00000587740 LCE1EQ5T753 118 aa4□□□□□ -1.77
NCLN-203ENST00000587740 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
NCLN-203ENST00000587740 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
NCLN-203ENST00000587740 LCE3DQ9BYE3 92 aa3.78□□□□□ -1.8
NCLN-203ENST00000587740 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
NCLN-203ENST00000587740 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
NCLN-203ENST00000587740 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
NCLN-203ENST00000587740 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
NCLN-203ENST00000587740 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
NCLN-203ENST00000587740 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
NCLN-203ENST00000587740 PHGR1C9JFL3 82 aa3.34□□□□□ -1.87
NCLN-203ENST00000587740 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
NCLN-203ENST00000587740 A0A0A0MQY5 61 aa3.25□□□□□ -1.89
NCLN-203ENST00000587740 H3BS24 57 aa3.22□□□□□ -1.89
NCLN-203ENST00000587740 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
NCLN-203ENST00000587740 INE1O15225 51 aa2.93□□□□□ -1.94
NCLN-203ENST00000587740 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
NCLN-203ENST00000587740 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
NCLN-203ENST00000587740 PRM1P04553 51 aa2.88□□□□□ -1.95
NCLN-203ENST00000587740 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
NCLN-203ENST00000587740 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 71.8 ms