RNA–Protein interactions for RNA: ENST00000587481.1

NUTF2-208, Transcript of nuclear transport factor 2, human

Gene NUTF2, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUTF2-208	ENST00000587481	MT3	P25713	68 aa		4.02	□□□□□ -1.77
NUTF2-208	ENST00000587481	MT1X	P80297	61 aa		4.02	□□□□□ -1.77
NUTF2-208	ENST00000587481	LCE1E	Q5T753	118 aa		4.02	□□□□□ -1.77
NUTF2-208	ENST00000587481	NEB	P20929	6669 aa		3.98	□□□□□ -1.77
NUTF2-208	ENST00000587481	MDN1	Q9NU22	5596 aa		3.95	□□□□□ -1.78
NUTF2-208	ENST00000587481	LCE3E	Q5T5B0	92 aa		3.94	□□□□□ -1.78
NUTF2-208	ENST00000587481	KRTAP5-9	P26371	169 aa		3.92	□□□□□ -1.78
NUTF2-208	ENST00000587481	SPRR2F	Q96RM1	72 aa		3.9	□□□□□ -1.79
NUTF2-208	ENST00000587481	KRTAP20-1	Q3LI63	56 aa		3.88	□□□□□ -1.79
NUTF2-208	ENST00000587481	KRTAP10-12	P60413	245 aa		3.87	□□□□□ -1.79
NUTF2-208	ENST00000587481	KRTAP4-8	A0A0G2JLE6	195 aa		3.86	□□□□□ -1.79
NUTF2-208	ENST00000587481	KRTAP4-8	Q9BYQ9	185 aa		3.86	□□□□□ -1.79
NUTF2-208	ENST00000587481	KRTAP10-7	P60409	375 aa	Predicted RBP	3.85	□□□□□ -1.79
NUTF2-208	ENST00000587481	KRTAP8-1	Q8IUC2	63 aa		3.85	□□□□□ -1.79
NUTF2-208	ENST00000587481	TNP1	P09430	55 aa		3.84	□□□□□ -1.79
NUTF2-208	ENST00000587481	SPRR2E	P22531	72 aa		3.83	□□□□□ -1.8
NUTF2-208	ENST00000587481	SPRR2B	P35325	72 aa		3.83	□□□□□ -1.8
NUTF2-208	ENST00000587481	SPRR2A	P35326	72 aa		3.83	□□□□□ -1.8
NUTF2-208	ENST00000587481	LCE1D	Q5T752	114 aa		3.83	□□□□□ -1.8
NUTF2-208	ENST00000587481	SPRR5	A0A1B0GTR4	108 aa		3.75	□□□□□ -1.81
NUTF2-208	ENST00000587481	KRTAP2-3	P0C7H8	128 aa		3.74	□□□□□ -1.81
NUTF2-208	ENST00000587481	KRTAP2-4	Q9BYR9	128 aa		3.74	□□□□□ -1.81
NUTF2-208	ENST00000587481	KRTAP4-12	Q9BQ66	201 aa		3.71	□□□□□ -1.82
NUTF2-208	ENST00000587481	SPRR2D	P22532	72 aa		3.69	□□□□□ -1.82
NUTF2-208	ENST00000587481	LCE3D	Q9BYE3	92 aa		3.64	□□□□□ -1.83
NUTF2-208	ENST00000587481	LCE3A	Q5TA76	89 aa		3.63	□□□□□ -1.83
NUTF2-208	ENST00000587481	KRTAP2-1	Q9BYU5	128 aa		3.62	□□□□□ -1.83
NUTF2-208	ENST00000587481	KRTAP19-7	Q3SYF9	63 aa		3.59	□□□□□ -1.83
NUTF2-208	ENST00000587481	LCE3B	Q5TA77	95 aa		3.59	□□□□□ -1.83
NUTF2-208	ENST00000587481	DST	Q03001	7570 aa	Known RBP	3.58	□□□□□ -1.84
NUTF2-208	ENST00000587481	KRTAP19-5	Q3LI72	72 aa		3.57	□□□□□ -1.84
NUTF2-208	ENST00000587481	MT1E	P04732	61 aa		3.54	□□□□□ -1.84
NUTF2-208	ENST00000587481	LOC100996750	A0A140TA64	210 aa		3.49	□□□□□ -1.85
NUTF2-208	ENST00000587481	KRTAP4-6	Q9BYQ5	205 aa		3.49	□□□□□ -1.85
NUTF2-208	ENST00000587481	KRTAP12-3	P60328	96 aa		3.47	□□□□□ -1.85
NUTF2-208	ENST00000587481	KRTAP12-4	P60329	112 aa		3.45	□□□□□ -1.86
NUTF2-208	ENST00000587481	KRTAP19-3	Q7Z4W3	81 aa		3.45	□□□□□ -1.86
NUTF2-208	ENST00000587481	KRTAP4-9	Q9BYQ8	210 aa		3.43	□□□□□ -1.86
NUTF2-208	ENST00000587481	MT1L	Q93083	61 aa		3.43	□□□□□ -1.86
NUTF2-208	ENST00000587481	MT1G	P13640	62 aa		3.37	□□□□□ -1.87
NUTF2-208	ENST00000587481	MT1M	Q8N339	61 aa		3.35	□□□□□ -1.87
NUTF2-208	ENST00000587481	KRTAP4-3	Q9BYR4	195 aa		3.35	□□□□□ -1.87
NUTF2-208	ENST00000587481	KRTAP4-7	Q9BYR0	210 aa		3.31	□□□□□ -1.88
NUTF2-208	ENST00000587481	MT4	P47944	62 aa		3.29	□□□□□ -1.88
NUTF2-208	ENST00000587481	GPR98	Q8WXG9	6306 aa		3.24	□□□□□ -1.89
NUTF2-208	ENST00000587481	HMCN1	Q96RW7	5635 aa		3.21	□□□□□ -1.9
NUTF2-208	ENST00000587481	KRTAP9-6	A8MVA2	160 aa		3.13	□□□□□ -1.91
NUTF2-208	ENST00000587481	KRTAP5-4	Q6L8H1	288 aa		3.13	□□□□□ -1.91
NUTF2-208	ENST00000587481	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.05	□□□□□ -1.92
NUTF2-208	ENST00000587481	AHNAK2	Q8IVF2	5795 aa		3.03	□□□□□ -1.92
NUTF2-208	ENST00000587481	KRTAP5-10	Q6L8G5	202 aa		3.02	□□□□□ -1.93
NUTF2-208	ENST00000587481	SYNE1	Q8NF91	8797 aa	Known RBP	3.01	□□□□□ -1.93
NUTF2-208	ENST00000587481	KRTAP20-2	Q3LI61	65 aa		3	□□□□□ -1.93
NUTF2-208	ENST00000587481	KRTAP5-3	Q6L8H2	238 aa		2.96	□□□□□ -1.94
NUTF2-208	ENST00000587481	KRTAP4-11	Q9BYQ6	195 aa		2.95	□□□□□ -1.94
NUTF2-208	ENST00000587481	MT1A	P04731	61 aa		2.91	□□□□□ -1.94
NUTF2-208	ENST00000587481	KRTAP6-1	Q3LI64	71 aa		2.89	□□□□□ -1.95
NUTF2-208	ENST00000587481	KRTAP5-7	Q6L8G8	165 aa		2.87	□□□□□ -1.95
NUTF2-208	ENST00000587481	OBSCN	Q5VST9	7968 aa		2.84	□□□□□ -1.96
NUTF2-208	ENST00000587481	KRTAP4-2	Q9BYR5	136 aa		2.76	□□□□□ -1.97
NUTF2-208	ENST00000587481	KRTAP6-2	Q3LI66	62 aa		2.73	□□□□□ -1.97
NUTF2-208	ENST00000587481	KRTAP5-2	Q701N4	177 aa		2.73	□□□□□ -1.97
NUTF2-208	ENST00000587481	KRTAP5-8	O75690	187 aa		2.65	□□□□□ -1.98
NUTF2-208	ENST00000587481	MUC19	Q7Z5P9	8384 aa		2.6	□□□□□ -1.99
NUTF2-208	ENST00000587481	LCE1C	Q5T751	118 aa		2.55	□□□□□ -2
NUTF2-208	ENST00000587481	LCE1B	Q5T7P3	118 aa		2.55	□□□□□ -2
NUTF2-208	ENST00000587481	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.54	□□□□□ -2
NUTF2-208	ENST00000587481	MUC5AC	P98088	5654 aa		2.51	□□□□□ -2.01
NUTF2-208	ENST00000587481	KRTAP5-1	Q6L8H4	278 aa		2.49	□□□□□ -2.01
NUTF2-208	ENST00000587481	AHNAK	Q09666	5890 aa	Known RBP	2.44	□□□□□ -2.02
NUTF2-208	ENST00000587481	PRM1	P04553	51 aa		2.4	□□□□□ -2.03
NUTF2-208	ENST00000587481	KRTAP5-11	Q6L8G4	156 aa		2.12	□□□□□ -2.07
NUTF2-208	ENST00000587481	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.03	□□□□□ -2.09
NUTF2-208	ENST00000587481	KRTAP21-2	Q3LI59	83 aa		1.9	□□□□□ -2.11
NUTF2-208	ENST00000587481	KRTAP4-4	Q9BYR3	166 aa		1.81	□□□□□ -2.12
NUTF2-208	ENST00000587481	PHGR1	C9JFL3	82 aa		1.79	□□□□□ -2.12
NUTF2-208	ENST00000587481	KRTAP21-1	Q3LI58	79 aa		1.7	□□□□□ -2.14
NUTF2-208	ENST00000587481	MUC16	Q8WXI7	14507 aa		1.1	□□□□□ -2.23

Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms