RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 BRK1Q8WUW1 75 aa4.77□□□□□ -1.65
H3F3B-205ENST00000587171 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
H3F3B-205ENST00000587171 UQCR11O14957 56 aa4.71□□□□□ -1.66
H3F3B-205ENST00000587171 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
H3F3B-205ENST00000587171 MIR22HGQ0VDD5 57 aa4.7□□□□□ -1.66
H3F3B-205ENST00000587171 MT1LQ93083 61 aa4.69□□□□□ -1.66
H3F3B-205ENST00000587171 C10orf95Q9H7T3 257 aa4.69□□□□□ -1.66
H3F3B-205ENST00000587171 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
H3F3B-205ENST00000587171 LCE3AQ5TA76 89 aa4.68□□□□□ -1.66
H3F3B-205ENST00000587171 MT1MQ8N339 61 aa4.68□□□□□ -1.66
H3F3B-205ENST00000587171 TNP1P09430 55 aa4.67□□□□□ -1.66
H3F3B-205ENST00000587171 HMCN1Q96RW7 5635 aa4.63□□□□□ -1.67
H3F3B-205ENST00000587171 PRO0628Q9UI54 55 aa4.62□□□□□ -1.67
H3F3B-205ENST00000587171 LCE1DQ5T752 114 aa4.61□□□□□ -1.67
H3F3B-205ENST00000587171 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
H3F3B-205ENST00000587171 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
H3F3B-205ENST00000587171 MT4P47944 62 aa4.53□□□□□ -1.68
H3F3B-205ENST00000587171 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
H3F3B-205ENST00000587171 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
H3F3B-205ENST00000587171 AHNAK2Q8IVF2 5795 aa4.47□□□□□ -1.69
H3F3B-205ENST00000587171 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
H3F3B-205ENST00000587171 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
H3F3B-205ENST00000587171 K7ERS5 55 aa4.43□□□□□ -1.7
H3F3B-205ENST00000587171 KRTAP4-6Q9BYQ5 205 aa4.41□□□□□ -1.7
H3F3B-205ENST00000587171 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
H3F3B-205ENST00000587171 KRTAP5-10Q6L8G5 202 aa4.32□□□□□ -1.72
H3F3B-205ENST00000587171 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
H3F3B-205ENST00000587171 ROMO1P60602 79 aa4.29□□□□□ -1.72
H3F3B-205ENST00000587171 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
H3F3B-205ENST00000587171 PRAC1Q96KF2 57 aa4.28□□□□□ -1.72
H3F3B-205ENST00000587171 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
H3F3B-205ENST00000587171 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
H3F3B-205ENST00000587171 SPRR5A0A1B0GTR4 108 aa4.23□□□□□ -1.73
H3F3B-205ENST00000587171 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
H3F3B-205ENST00000587171 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
H3F3B-205ENST00000587171 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
H3F3B-205ENST00000587171 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
H3F3B-205ENST00000587171 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
H3F3B-205ENST00000587171 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
H3F3B-205ENST00000587171 KRTAP5-7Q6L8G8 165 aa4.18□□□□□ -1.74
H3F3B-205ENST00000587171 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
H3F3B-205ENST00000587171 MT1AP04731 61 aa3.99□□□□□ -1.77
H3F3B-205ENST00000587171 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
H3F3B-205ENST00000587171 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
H3F3B-205ENST00000587171 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
H3F3B-205ENST00000587171 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
H3F3B-205ENST00000587171 H3BS24 57 aa3.86□□□□□ -1.79
H3F3B-205ENST00000587171 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
H3F3B-205ENST00000587171 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
H3F3B-205ENST00000587171 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
H3F3B-205ENST00000587171 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
H3F3B-205ENST00000587171 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
H3F3B-205ENST00000587171 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
H3F3B-205ENST00000587171 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
H3F3B-205ENST00000587171 MT3P25713 68 aa3.64□□□□□ -1.83
H3F3B-205ENST00000587171 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
H3F3B-205ENST00000587171 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
H3F3B-205ENST00000587171 A0A0A0MQY5 61 aa3.53□□□□□ -1.84
H3F3B-205ENST00000587171 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
H3F3B-205ENST00000587171 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
H3F3B-205ENST00000587171 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
H3F3B-205ENST00000587171 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
H3F3B-205ENST00000587171 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
H3F3B-205ENST00000587171 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
H3F3B-205ENST00000587171 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
H3F3B-205ENST00000587171 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
H3F3B-205ENST00000587171 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
H3F3B-205ENST00000587171 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
H3F3B-205ENST00000587171 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
H3F3B-205ENST00000587171 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
H3F3B-205ENST00000587171 INE1O15225 51 aa2.7□□□□□ -1.98
H3F3B-205ENST00000587171 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
H3F3B-205ENST00000587171 PHGR1C9JFL3 82 aa2.57□□□□□ -2
H3F3B-205ENST00000587171 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
H3F3B-205ENST00000587171 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
H3F3B-205ENST00000587171 PRM1P04553 51 aa2.28□□□□□ -2.04
H3F3B-205ENST00000587171 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
H3F3B-205ENST00000587171 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 54.9 ms