RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 KRTAP2-2Q9BYT5 123 aa6.17□□□□□ -1.42
VAT1-204ENST00000587147 KRTAP2-1Q9BYU5 128 aa6.17□□□□□ -1.42
VAT1-204ENST00000587147 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
VAT1-204ENST00000587147 MT1GP13640 62 aa6.1□□□□□ -1.43
VAT1-204ENST00000587147 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
VAT1-204ENST00000587147 MT1LQ93083 61 aa6.03□□□□□ -1.44
VAT1-204ENST00000587147 CDC42SE1Q9NRR8 79 aa6.02□□□□□ -1.45
VAT1-204ENST00000587147 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
VAT1-204ENST00000587147 KRTAP12-3P60328 96 aa6□□□□□ -1.45
VAT1-204ENST00000587147 MT1MQ8N339 61 aa5.95□□□□□ -1.46
VAT1-204ENST00000587147 ROMO1P60602 79 aa5.89□□□□□ -1.47
VAT1-204ENST00000587147 DSTQ03001 7570 aaKnown RBP5.88□□□□□ -1.47
VAT1-204ENST00000587147 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
VAT1-204ENST00000587147 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
VAT1-204ENST00000587147 KRTAP4-3Q9BYR4 195 aa5.7□□□□□ -1.5
VAT1-204ENST00000587147 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
VAT1-204ENST00000587147 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
VAT1-204ENST00000587147 KRTAP5-4Q6L8H1 288 aa5.59□□□□□ -1.51
VAT1-204ENST00000587147 BRK1Q8WUW1 75 aa5.56□□□□□ -1.52
VAT1-204ENST00000587147 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
VAT1-204ENST00000587147 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
VAT1-204ENST00000587147 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
VAT1-204ENST00000587147 KRTAP5-5Q701N2 237 aaPredicted RBP5.47□□□□□ -1.53
VAT1-204ENST00000587147 MT4P47944 62 aa5.44□□□□□ -1.54
VAT1-204ENST00000587147 HMCN1Q96RW7 5635 aa5.42□□□□□ -1.54
VAT1-204ENST00000587147 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
VAT1-204ENST00000587147 KRTAP4-6Q9BYQ5 205 aa5.32□□□□□ -1.56
VAT1-204ENST00000587147 SPRR5A0A1B0GTR4 108 aa5.29□□□□□ -1.56
VAT1-204ENST00000587147 KRTAP12-4P60329 112 aa5.29□□□□□ -1.56
VAT1-204ENST00000587147 PMAIP1Q13794 54 aa5.27□□□□□ -1.57
VAT1-204ENST00000587147 KRTAP20-2Q3LI61 65 aa5.22□□□□□ -1.57
VAT1-204ENST00000587147 GPR98Q8WXG9 6306 aa5.21□□□□□ -1.58
VAT1-204ENST00000587147 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
VAT1-204ENST00000587147 MT1AP04731 61 aa5.16□□□□□ -1.58
VAT1-204ENST00000587147 AHNAK2Q8IVF2 5795 aa5.11□□□□□ -1.59
VAT1-204ENST00000587147 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
VAT1-204ENST00000587147 PRO0628Q9UI54 55 aa5.1□□□□□ -1.59
VAT1-204ENST00000587147 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
VAT1-204ENST00000587147 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
VAT1-204ENST00000587147 KRTAP5-10Q6L8G5 202 aa5.04□□□□□ -1.6
VAT1-204ENST00000587147 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.62
VAT1-204ENST00000587147 KRTAP5-2Q701N4 177 aa4.94□□□□□ -1.62
VAT1-204ENST00000587147 PRAC1Q96KF2 57 aa4.93□□□□□ -1.62
VAT1-204ENST00000587147 KRTAP5-7Q6L8G8 165 aa4.83□□□□□ -1.64
VAT1-204ENST00000587147 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
VAT1-204ENST00000587147 KRTAP6-2Q3LI66 62 aa4.8□□□□□ -1.64
VAT1-204ENST00000587147 MT3P25713 68 aa4.73□□□□□ -1.65
VAT1-204ENST00000587147 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
VAT1-204ENST00000587147 KRTAP5-8O75690 187 aa4.54□□□□□ -1.68
VAT1-204ENST00000587147 SVIPQ8NHG7 77 aa4.52□□□□□ -1.69
VAT1-204ENST00000587147 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
VAT1-204ENST00000587147 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
VAT1-204ENST00000587147 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
VAT1-204ENST00000587147 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
VAT1-204ENST00000587147 LUZP6Q538Z0 58 aa4.26□□□□□ -1.73
VAT1-204ENST00000587147 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
VAT1-204ENST00000587147 MUC5BQ9HC84 5762 aaPredicted RBP4.2□□□□□ -1.74
VAT1-204ENST00000587147 AHNAKQ09666 5890 aaKnown RBP4.14□□□□□ -1.75
VAT1-204ENST00000587147 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
VAT1-204ENST00000587147 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
VAT1-204ENST00000587147 LCE1BQ5T7P3 118 aa4.01□□□□□ -1.77
VAT1-204ENST00000587147 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
VAT1-204ENST00000587147 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
VAT1-204ENST00000587147 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
VAT1-204ENST00000587147 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
VAT1-204ENST00000587147 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
VAT1-204ENST00000587147 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
VAT1-204ENST00000587147 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
VAT1-204ENST00000587147 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
VAT1-204ENST00000587147 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
VAT1-204ENST00000587147 INE1O15225 51 aa2.99□□□□□ -1.93
VAT1-204ENST00000587147 PRM1P04553 51 aa2.98□□□□□ -1.93
VAT1-204ENST00000587147 A0A0A0MQY5 61 aa2.97□□□□□ -1.93
VAT1-204ENST00000587147 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
VAT1-204ENST00000587147 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
VAT1-204ENST00000587147 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
VAT1-204ENST00000587147 H3BS24 57 aa2.01□□□□□ -2.09
VAT1-204ENST00000587147 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 64.8 ms