RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
SMARCA4-210ENST00000586892 CDC42SE1Q9NRR8 79 aa4.88□□□□□ -1.63
SMARCA4-210ENST00000586892 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
SMARCA4-210ENST00000586892 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
SMARCA4-210ENST00000586892 BRK1Q8WUW1 75 aa4.8□□□□□ -1.64
SMARCA4-210ENST00000586892 MT1GP13640 62 aa4.78□□□□□ -1.64
SMARCA4-210ENST00000586892 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
SMARCA4-210ENST00000586892 MT1LQ93083 61 aa4.74□□□□□ -1.65
SMARCA4-210ENST00000586892 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
SMARCA4-210ENST00000586892 MT1MQ8N339 61 aa4.69□□□□□ -1.66
SMARCA4-210ENST00000586892 KRTAP12-3P60328 96 aa4.67□□□□□ -1.66
SMARCA4-210ENST00000586892 ROMO1P60602 79 aa4.61□□□□□ -1.67
SMARCA4-210ENST00000586892 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
SMARCA4-210ENST00000586892 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
SMARCA4-210ENST00000586892 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
SMARCA4-210ENST00000586892 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
SMARCA4-210ENST00000586892 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
SMARCA4-210ENST00000586892 KRTAP4-7Q9BYR0 210 aa4.49□□□□□ -1.69
SMARCA4-210ENST00000586892 LCE4AQ5TA78 99 aa4.48□□□□□ -1.69
SMARCA4-210ENST00000586892 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.7
SMARCA4-210ENST00000586892 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
SMARCA4-210ENST00000586892 HMCN1Q96RW7 5635 aa4.42□□□□□ -1.7
SMARCA4-210ENST00000586892 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
SMARCA4-210ENST00000586892 KRTAP5-4Q6L8H1 288 aa4.41□□□□□ -1.7
SMARCA4-210ENST00000586892 MT4P47944 62 aa4.39□□□□□ -1.71
SMARCA4-210ENST00000586892 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
SMARCA4-210ENST00000586892 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
SMARCA4-210ENST00000586892 GPR98Q8WXG9 6306 aa4.3□□□□□ -1.72
SMARCA4-210ENST00000586892 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
SMARCA4-210ENST00000586892 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
SMARCA4-210ENST00000586892 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
SMARCA4-210ENST00000586892 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
SMARCA4-210ENST00000586892 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.74
SMARCA4-210ENST00000586892 KRTAP12-4P60329 112 aa4.18□□□□□ -1.74
SMARCA4-210ENST00000586892 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
SMARCA4-210ENST00000586892 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.75
SMARCA4-210ENST00000586892 SYNE1Q8NF91 8797 aaKnown RBP4.11□□□□□ -1.75
SMARCA4-210ENST00000586892 SVIPQ8NHG7 77 aa4.09□□□□□ -1.75
SMARCA4-210ENST00000586892 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
SMARCA4-210ENST00000586892 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
SMARCA4-210ENST00000586892 MT1AP04731 61 aa4.04□□□□□ -1.76
SMARCA4-210ENST00000586892 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
SMARCA4-210ENST00000586892 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
SMARCA4-210ENST00000586892 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
SMARCA4-210ENST00000586892 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
SMARCA4-210ENST00000586892 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
SMARCA4-210ENST00000586892 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
SMARCA4-210ENST00000586892 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
SMARCA4-210ENST00000586892 MT3P25713 68 aa3.7□□□□□ -1.82
SMARCA4-210ENST00000586892 OBSCNQ5VST9 7968 aa3.68□□□□□ -1.82
SMARCA4-210ENST00000586892 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
SMARCA4-210ENST00000586892 LUZP6Q538Z0 58 aa3.58□□□□□ -1.84
SMARCA4-210ENST00000586892 MUC5ACP98088 5654 aa3.46□□□□□ -1.85
SMARCA4-210ENST00000586892 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.85
SMARCA4-210ENST00000586892 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
SMARCA4-210ENST00000586892 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
SMARCA4-210ENST00000586892 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
SMARCA4-210ENST00000586892 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
SMARCA4-210ENST00000586892 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
SMARCA4-210ENST00000586892 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
SMARCA4-210ENST00000586892 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
SMARCA4-210ENST00000586892 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
SMARCA4-210ENST00000586892 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
SMARCA4-210ENST00000586892 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
SMARCA4-210ENST00000586892 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
SMARCA4-210ENST00000586892 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
SMARCA4-210ENST00000586892 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
SMARCA4-210ENST00000586892 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
SMARCA4-210ENST00000586892 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
SMARCA4-210ENST00000586892 INE1O15225 51 aa2.69□□□□□ -1.98
SMARCA4-210ENST00000586892 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
SMARCA4-210ENST00000586892 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
SMARCA4-210ENST00000586892 H3BS24 57 aa2.41□□□□□ -2.02
SMARCA4-210ENST00000586892 PRM1P04553 51 aa2.38□□□□□ -2.03
SMARCA4-210ENST00000586892 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
SMARCA4-210ENST00000586892 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
SMARCA4-210ENST00000586892 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
SMARCA4-210ENST00000586892 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 50 ms