RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 LCE5AQ5TCM9 118 aa7.75□□□□□ -1.17
RETREG3-204ENST00000586796 LCE3BQ5TA77 95 aa7.69□□□□□ -1.18
RETREG3-204ENST00000586796 MT1LQ93083 61 aa7.66□□□□□ -1.18
RETREG3-204ENST00000586796 MT1GP13640 62 aa7.65□□□□□ -1.18
RETREG3-204ENST00000586796 KRTAP12-3P60328 96 aa7.65□□□□□ -1.18
RETREG3-204ENST00000586796 KRTAP2-2Q9BYT5 123 aa7.65□□□□□ -1.18
RETREG3-204ENST00000586796 KRTAP2-1Q9BYU5 128 aa7.65□□□□□ -1.18
RETREG3-204ENST00000586796 ROMO1P60602 79 aa7.64□□□□□ -1.19
RETREG3-204ENST00000586796 PP632Q6XCG6 107 aa7.59□□□□□ -1.19
RETREG3-204ENST00000586796 MT1MQ8N339 61 aa7.54□□□□□ -1.2
RETREG3-204ENST00000586796 KRTAP23-1A1A580 65 aa7.51□□□□□ -1.21
RETREG3-204ENST00000586796 DSTQ03001 7570 aaKnown RBP7.44□□□□□ -1.22
RETREG3-204ENST00000586796 BRK1Q8WUW1 75 aa7.44□□□□□ -1.22
RETREG3-204ENST00000586796 KRTAP4-3Q9BYR4 195 aa7.4□□□□□ -1.22
RETREG3-204ENST00000586796 KRTAP4-7Q9BYR0 210 aa7.36□□□□□ -1.23
RETREG3-204ENST00000586796 KRTAP15-1Q3LI76 137 aa7.28□□□□□ -1.24
RETREG3-204ENST00000586796 KRTAP19-4Q3LI73 84 aa7.14□□□□□ -1.27
RETREG3-204ENST00000586796 KRTAP4-9Q9BYQ8 210 aa7.09□□□□□ -1.27
RETREG3-204ENST00000586796 LCE3CQ5T5A8 94 aa7.08□□□□□ -1.28
RETREG3-204ENST00000586796 PMAIP1Q13794 54 aa7□□□□□ -1.29
RETREG3-204ENST00000586796 LCE4AQ5TA78 99 aa7□□□□□ -1.29
RETREG3-204ENST00000586796 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
RETREG3-204ENST00000586796 MT4P47944 62 aa6.95□□□□□ -1.3
RETREG3-204ENST00000586796 LCE1DQ5T752 114 aa6.93□□□□□ -1.3
RETREG3-204ENST00000586796 KRTAP5-4Q6L8H1 288 aa6.92□□□□□ -1.3
RETREG3-204ENST00000586796 KRTAP5-5Q701N2 237 aaPredicted RBP6.84□□□□□ -1.31
RETREG3-204ENST00000586796 KRTAP4-6Q9BYQ5 205 aa6.77□□□□□ -1.33
RETREG3-204ENST00000586796 PRO0628Q9UI54 55 aa6.75□□□□□ -1.33
RETREG3-204ENST00000586796 HMCN1Q96RW7 5635 aa6.74□□□□□ -1.33
RETREG3-204ENST00000586796 PRAC1Q96KF2 57 aa6.69□□□□□ -1.34
RETREG3-204ENST00000586796 KRTAP9-6A8MVA2 160 aa6.67□□□□□ -1.34
RETREG3-204ENST00000586796 KRTAP12-4P60329 112 aa6.6□□□□□ -1.35
RETREG3-204ENST00000586796 SYNE1Q8NF91 8797 aaKnown RBP6.56□□□□□ -1.36
RETREG3-204ENST00000586796 KRTAP20-2Q3LI61 65 aa6.54□□□□□ -1.36
RETREG3-204ENST00000586796 SPRR5A0A1B0GTR4 108 aa6.52□□□□□ -1.37
RETREG3-204ENST00000586796 MT1AP04731 61 aa6.51□□□□□ -1.37
RETREG3-204ENST00000586796 KRTAP6-1Q3LI64 71 aa6.48□□□□□ -1.37
RETREG3-204ENST00000586796 GPR98Q8WXG9 6306 aa6.47□□□□□ -1.37
RETREG3-204ENST00000586796 KTN1-AS1Q86SY8 53 aa6.39□□□□□ -1.39
RETREG3-204ENST00000586796 AHNAK2Q8IVF2 5795 aa6.38□□□□□ -1.39
RETREG3-204ENST00000586796 KRTAP5-3Q6L8H2 238 aa6.31□□□□□ -1.4
RETREG3-204ENST00000586796 KRTAP9-4Q9BYQ2 154 aa6.27□□□□□ -1.41
RETREG3-204ENST00000586796 KRTAP5-10Q6L8G5 202 aa6.2□□□□□ -1.42
RETREG3-204ENST00000586796 SVIPQ8NHG7 77 aa6.15□□□□□ -1.42
RETREG3-204ENST00000586796 KRTAP6-2Q3LI66 62 aa6.12□□□□□ -1.43
RETREG3-204ENST00000586796 KRTAP5-2Q701N4 177 aa6.12□□□□□ -1.43
RETREG3-204ENST00000586796 MT3P25713 68 aa5.95□□□□□ -1.46
RETREG3-204ENST00000586796 H3BS24 57 aa5.94□□□□□ -1.46
RETREG3-204ENST00000586796 KRTAP5-7Q6L8G8 165 aa5.9□□□□□ -1.46
RETREG3-204ENST00000586796 KRTAP4-11Q9BYQ6 195 aa5.88□□□□□ -1.47
RETREG3-204ENST00000586796 OBSCNQ5VST9 7968 aa5.67□□□□□ -1.5
RETREG3-204ENST00000586796 KRTAP5-8O75690 187 aa5.67□□□□□ -1.5
RETREG3-204ENST00000586796 LUZP6Q538Z0 58 aa5.56□□□□□ -1.52
RETREG3-204ENST00000586796 KRTAP5-1Q6L8H4 278 aa5.43□□□□□ -1.54
RETREG3-204ENST00000586796 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
RETREG3-204ENST00000586796 LCE1EQ5T753 118 aa5.32□□□□□ -1.56
RETREG3-204ENST00000586796 MUC5ACP98088 5654 aa5.26□□□□□ -1.57
RETREG3-204ENST00000586796 LCE3DQ9BYE3 92 aa5.18□□□□□ -1.58
RETREG3-204ENST00000586796 MUC5BQ9HC84 5762 aaPredicted RBP5.15□□□□□ -1.58
RETREG3-204ENST00000586796 KRTAP4-12Q9BQ66 201 aa5.14□□□□□ -1.59
RETREG3-204ENST00000586796 AHNAKQ09666 5890 aaKnown RBP5.12□□□□□ -1.59
RETREG3-204ENST00000586796 LCE1BQ5T7P3 118 aa5.09□□□□□ -1.59
RETREG3-204ENST00000586796 KRTAP4-2Q9BYR5 136 aa5.02□□□□□ -1.61
RETREG3-204ENST00000586796 LCE1CQ5T751 118 aa4.95□□□□□ -1.62
RETREG3-204ENST00000586796 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
RETREG3-204ENST00000586796 NDUFAF8A1L188 74 aa4.84□□□□□ -1.63
RETREG3-204ENST00000586796 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.52□□□□□ -1.69
RETREG3-204ENST00000586796 KRTAP5-11Q6L8G4 156 aa4.44□□□□□ -1.7
RETREG3-204ENST00000586796 KRTAP21-2Q3LI59 83 aa4.24□□□□□ -1.73
RETREG3-204ENST00000586796 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
RETREG3-204ENST00000586796 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
RETREG3-204ENST00000586796 PRM1P04553 51 aa3.95□□□□□ -1.78
RETREG3-204ENST00000586796 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
RETREG3-204ENST00000586796 INE1O15225 51 aa3.88□□□□□ -1.79
RETREG3-204ENST00000586796 PHGR1C9JFL3 82 aa3.84□□□□□ -1.79
RETREG3-204ENST00000586796 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.85
RETREG3-204ENST00000586796 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
RETREG3-204ENST00000586796 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 5.4 ms