RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 KRTAP2-1Q9BYU5 128 aa6.26□□□□□ -1.41
ATG4D-205ENST00000586477 ROMO1P60602 79 aa6.25□□□□□ -1.41
ATG4D-205ENST00000586477 SPRR2DP22532 72 aa6.24□□□□□ -1.41
ATG4D-205ENST00000586477 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
ATG4D-205ENST00000586477 LCE3BQ5TA77 95 aa6.08□□□□□ -1.44
ATG4D-205ENST00000586477 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
ATG4D-205ENST00000586477 PP632Q6XCG6 107 aa6.02□□□□□ -1.45
ATG4D-205ENST00000586477 KRTAP19-7Q3SYF9 63 aa5.99□□□□□ -1.45
ATG4D-205ENST00000586477 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
ATG4D-205ENST00000586477 MT1EP04732 61 aa5.92□□□□□ -1.46
ATG4D-205ENST00000586477 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
ATG4D-205ENST00000586477 LCE5AQ5TCM9 118 aa5.88□□□□□ -1.47
ATG4D-205ENST00000586477 DSTQ03001 7570 aaKnown RBP5.88□□□□□ -1.47
ATG4D-205ENST00000586477 KRTAP19-3Q7Z4W3 81 aa5.84□□□□□ -1.47
ATG4D-205ENST00000586477 PRAC1Q96KF2 57 aa5.83□□□□□ -1.48
ATG4D-205ENST00000586477 MT1GP13640 62 aa5.73□□□□□ -1.49
ATG4D-205ENST00000586477 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
ATG4D-205ENST00000586477 MT1LQ93083 61 aa5.71□□□□□ -1.5
ATG4D-205ENST00000586477 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
ATG4D-205ENST00000586477 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
ATG4D-205ENST00000586477 MT1MQ8N339 61 aa5.63□□□□□ -1.51
ATG4D-205ENST00000586477 GPR98Q8WXG9 6306 aa5.62□□□□□ -1.51
ATG4D-205ENST00000586477 H3BS24 57 aa5.56□□□□□ -1.52
ATG4D-205ENST00000586477 KRTAP4-3Q9BYR4 195 aa5.55□□□□□ -1.52
ATG4D-205ENST00000586477 LCE1DQ5T752 114 aa5.54□□□□□ -1.52
ATG4D-205ENST00000586477 LCE4AQ5TA78 99 aa5.49□□□□□ -1.53
ATG4D-205ENST00000586477 HMCN1Q96RW7 5635 aa5.48□□□□□ -1.53
ATG4D-205ENST00000586477 MT4P47944 62 aa5.47□□□□□ -1.53
ATG4D-205ENST00000586477 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.54
ATG4D-205ENST00000586477 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
ATG4D-205ENST00000586477 KRTAP5-4Q6L8H1 288 aa5.39□□□□□ -1.55
ATG4D-205ENST00000586477 AHNAK2Q8IVF2 5795 aa5.34□□□□□ -1.55
ATG4D-205ENST00000586477 KRTAP4-6Q9BYQ5 205 aa5.29□□□□□ -1.56
ATG4D-205ENST00000586477 KRTAP5-10Q6L8G5 202 aa5.21□□□□□ -1.58
ATG4D-205ENST00000586477 KRTAP5-5Q701N2 237 aaPredicted RBP5.2□□□□□ -1.58
ATG4D-205ENST00000586477 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
ATG4D-205ENST00000586477 KRTAP20-2Q3LI61 65 aa5.07□□□□□ -1.6
ATG4D-205ENST00000586477 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
ATG4D-205ENST00000586477 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
ATG4D-205ENST00000586477 NDUFAF8A1L188 74 aa5.04□□□□□ -1.6
ATG4D-205ENST00000586477 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
ATG4D-205ENST00000586477 KRTAP5-7Q6L8G8 165 aa5.03□□□□□ -1.6
ATG4D-205ENST00000586477 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
ATG4D-205ENST00000586477 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
ATG4D-205ENST00000586477 MT1AP04731 61 aa4.9□□□□□ -1.63
ATG4D-205ENST00000586477 LUZP6Q538Z0 58 aa4.84□□□□□ -1.63
ATG4D-205ENST00000586477 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
ATG4D-205ENST00000586477 A0A0A0MQY5 61 aa4.74□□□□□ -1.65
ATG4D-205ENST00000586477 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
ATG4D-205ENST00000586477 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
ATG4D-205ENST00000586477 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
ATG4D-205ENST00000586477 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
ATG4D-205ENST00000586477 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
ATG4D-205ENST00000586477 MT3P25713 68 aa4.5□□□□□ -1.69
ATG4D-205ENST00000586477 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
ATG4D-205ENST00000586477 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
ATG4D-205ENST00000586477 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
ATG4D-205ENST00000586477 MUC5BQ9HC84 5762 aaPredicted RBP4.38□□□□□ -1.71
ATG4D-205ENST00000586477 INE1O15225 51 aa4.35□□□□□ -1.71
ATG4D-205ENST00000586477 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
ATG4D-205ENST00000586477 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
ATG4D-205ENST00000586477 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
ATG4D-205ENST00000586477 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
ATG4D-205ENST00000586477 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
ATG4D-205ENST00000586477 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
ATG4D-205ENST00000586477 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
ATG4D-205ENST00000586477 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
ATG4D-205ENST00000586477 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
ATG4D-205ENST00000586477 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
ATG4D-205ENST00000586477 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
ATG4D-205ENST00000586477 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
ATG4D-205ENST00000586477 PRM1P04553 51 aa3.19□□□□□ -1.9
ATG4D-205ENST00000586477 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
ATG4D-205ENST00000586477 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
ATG4D-205ENST00000586477 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
ATG4D-205ENST00000586477 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
ATG4D-205ENST00000586477 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
ATG4D-205ENST00000586477 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 115.4 ms