RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 KRTAP10-7P60409 375 aaPredicted RBP4.91□□□□□ -1.62
ERCC2-207ENST00000586441 KRTAP4-8Q9BYQ9 185 aa4.91□□□□□ -1.62
ERCC2-207ENST00000586441 LCE1AQ5T7P2 110 aa4.9□□□□□ -1.63
ERCC2-207ENST00000586441 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
ERCC2-207ENST00000586441 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
ERCC2-207ENST00000586441 SPRR2DP22532 72 aa4.77□□□□□ -1.65
ERCC2-207ENST00000586441 LCE3AQ5TA76 89 aa4.67□□□□□ -1.66
ERCC2-207ENST00000586441 KRTAP15-1Q3LI76 137 aa4.66□□□□□ -1.66
ERCC2-207ENST00000586441 LCE3BQ5TA77 95 aa4.65□□□□□ -1.67
ERCC2-207ENST00000586441 KRTAP19-7Q3SYF9 63 aa4.63□□□□□ -1.67
ERCC2-207ENST00000586441 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
ERCC2-207ENST00000586441 GPR98Q8WXG9 6306 aa4.6□□□□□ -1.67
ERCC2-207ENST00000586441 MT1EP04732 61 aa4.59□□□□□ -1.67
ERCC2-207ENST00000586441 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
ERCC2-207ENST00000586441 MT1GP13640 62 aa4.51□□□□□ -1.69
ERCC2-207ENST00000586441 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
ERCC2-207ENST00000586441 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
ERCC2-207ENST00000586441 KRTAP19-5Q3LI72 72 aa4.49□□□□□ -1.69
ERCC2-207ENST00000586441 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
ERCC2-207ENST00000586441 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
ERCC2-207ENST00000586441 MT1LQ93083 61 aa4.39□□□□□ -1.71
ERCC2-207ENST00000586441 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
ERCC2-207ENST00000586441 MT1MQ8N339 61 aa4.36□□□□□ -1.71
ERCC2-207ENST00000586441 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
ERCC2-207ENST00000586441 H3BS24 57 aa4.31□□□□□ -1.72
ERCC2-207ENST00000586441 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
ERCC2-207ENST00000586441 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
ERCC2-207ENST00000586441 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
ERCC2-207ENST00000586441 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
ERCC2-207ENST00000586441 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
ERCC2-207ENST00000586441 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
ERCC2-207ENST00000586441 MT4P47944 62 aa4.13□□□□□ -1.75
ERCC2-207ENST00000586441 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
ERCC2-207ENST00000586441 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
ERCC2-207ENST00000586441 KRTAP4-6Q9BYQ5 205 aa4.04□□□□□ -1.76
ERCC2-207ENST00000586441 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
ERCC2-207ENST00000586441 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
ERCC2-207ENST00000586441 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
ERCC2-207ENST00000586441 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
ERCC2-207ENST00000586441 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
ERCC2-207ENST00000586441 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
ERCC2-207ENST00000586441 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
ERCC2-207ENST00000586441 LOC100996750A0A140TA64 210 aa3.89□□□□□ -1.79
ERCC2-207ENST00000586441 KRTAP5-7Q6L8G8 165 aa3.88□□□□□ -1.79
ERCC2-207ENST00000586441 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
ERCC2-207ENST00000586441 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
ERCC2-207ENST00000586441 MT1AP04731 61 aa3.75□□□□□ -1.81
ERCC2-207ENST00000586441 INE1O15225 51 aa3.7□□□□□ -1.82
ERCC2-207ENST00000586441 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
ERCC2-207ENST00000586441 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
ERCC2-207ENST00000586441 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
ERCC2-207ENST00000586441 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
ERCC2-207ENST00000586441 AHNAKQ09666 5890 aaKnown RBP3.56□□□□□ -1.84
ERCC2-207ENST00000586441 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
ERCC2-207ENST00000586441 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
ERCC2-207ENST00000586441 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
ERCC2-207ENST00000586441 MT3P25713 68 aa3.45□□□□□ -1.86
ERCC2-207ENST00000586441 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
ERCC2-207ENST00000586441 MUC5BQ9HC84 5762 aaPredicted RBP3.41□□□□□ -1.86
ERCC2-207ENST00000586441 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
ERCC2-207ENST00000586441 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
ERCC2-207ENST00000586441 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
ERCC2-207ENST00000586441 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
ERCC2-207ENST00000586441 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
ERCC2-207ENST00000586441 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
ERCC2-207ENST00000586441 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
ERCC2-207ENST00000586441 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
ERCC2-207ENST00000586441 PRM1P04553 51 aa2.8□□□□□ -1.96
ERCC2-207ENST00000586441 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
ERCC2-207ENST00000586441 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
ERCC2-207ENST00000586441 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
ERCC2-207ENST00000586441 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
ERCC2-207ENST00000586441 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
ERCC2-207ENST00000586441 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
ERCC2-207ENST00000586441 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
ERCC2-207ENST00000586441 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
ERCC2-207ENST00000586441 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
ERCC2-207ENST00000586441 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms