RNA–Protein interactions for RNA: ENST00000585543.6

GFAP-205, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-205ENST00000585543 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
GFAP-205ENST00000585543 KRTAP2-3P0C7H8 128 aa6.08□□□□□ -1.44
GFAP-205ENST00000585543 KRTAP2-4Q9BYR9 128 aa6.08□□□□□ -1.44
GFAP-205ENST00000585543 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
GFAP-205ENST00000585543 PP632Q6XCG6 107 aa6.03□□□□□ -1.44
GFAP-205ENST00000585543 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
GFAP-205ENST00000585543 MT1GP13640 62 aa6□□□□□ -1.45
GFAP-205ENST00000585543 MT1LQ93083 61 aa5.98□□□□□ -1.45
GFAP-205ENST00000585543 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
GFAP-205ENST00000585543 KRTAP2-2Q9BYT5 123 aa5.91□□□□□ -1.46
GFAP-205ENST00000585543 KRTAP2-1Q9BYU5 128 aa5.91□□□□□ -1.46
GFAP-205ENST00000585543 MT1MQ8N339 61 aa5.88□□□□□ -1.47
GFAP-205ENST00000585543 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
GFAP-205ENST00000585543 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
GFAP-205ENST00000585543 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
GFAP-205ENST00000585543 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
GFAP-205ENST00000585543 KRTAP4-3Q9BYR4 195 aa5.67□□□□□ -1.5
GFAP-205ENST00000585543 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
GFAP-205ENST00000585543 PRO0628Q9UI54 55 aa5.65□□□□□ -1.5
GFAP-205ENST00000585543 LCE3CQ5T5A8 94 aa5.6□□□□□ -1.51
GFAP-205ENST00000585543 LCE4AQ5TA78 99 aa5.47□□□□□ -1.53
GFAP-205ENST00000585543 PRAC1Q96KF2 57 aa5.41□□□□□ -1.54
GFAP-205ENST00000585543 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
GFAP-205ENST00000585543 KRTAP5-4Q6L8H1 288 aa5.36□□□□□ -1.55
GFAP-205ENST00000585543 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
GFAP-205ENST00000585543 KTN1-AS1Q86SY8 53 aa5.34□□□□□ -1.55
GFAP-205ENST00000585543 MT4P47944 62 aa5.33□□□□□ -1.56
GFAP-205ENST00000585543 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
GFAP-205ENST00000585543 KRTAP5-5Q701N2 237 aaPredicted RBP5.3□□□□□ -1.56
GFAP-205ENST00000585543 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
GFAP-205ENST00000585543 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
GFAP-205ENST00000585543 HMCN1Q96RW7 5635 aa5.16□□□□□ -1.58
GFAP-205ENST00000585543 KRTAP4-6Q9BYQ5 205 aa5.16□□□□□ -1.58
GFAP-205ENST00000585543 SVIPQ8NHG7 77 aa5.14□□□□□ -1.59
GFAP-205ENST00000585543 MT1AP04731 61 aa5.12□□□□□ -1.59
GFAP-205ENST00000585543 SPRR5A0A1B0GTR4 108 aa5.1□□□□□ -1.59
GFAP-205ENST00000585543 KRTAP20-2Q3LI61 65 aa5.06□□□□□ -1.6
GFAP-205ENST00000585543 KRTAP6-1Q3LI64 71 aa5.02□□□□□ -1.61
GFAP-205ENST00000585543 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
GFAP-205ENST00000585543 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
GFAP-205ENST00000585543 AHNAK2Q8IVF2 5795 aa4.86□□□□□ -1.63
GFAP-205ENST00000585543 GPR98Q8WXG9 6306 aa4.85□□□□□ -1.63
GFAP-205ENST00000585543 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
GFAP-205ENST00000585543 KRTAP6-2Q3LI66 62 aa4.75□□□□□ -1.65
GFAP-205ENST00000585543 KRTAP5-2Q701N4 177 aa4.75□□□□□ -1.65
GFAP-205ENST00000585543 KRTAP5-10Q6L8G5 202 aa4.72□□□□□ -1.65
GFAP-205ENST00000585543 MT3P25713 68 aa4.7□□□□□ -1.66
GFAP-205ENST00000585543 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
GFAP-205ENST00000585543 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
GFAP-205ENST00000585543 KRTAP5-7Q6L8G8 165 aa4.52□□□□□ -1.69
GFAP-205ENST00000585543 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
GFAP-205ENST00000585543 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
GFAP-205ENST00000585543 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
GFAP-205ENST00000585543 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
GFAP-205ENST00000585543 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
GFAP-205ENST00000585543 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
GFAP-205ENST00000585543 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
GFAP-205ENST00000585543 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
GFAP-205ENST00000585543 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
GFAP-205ENST00000585543 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
GFAP-205ENST00000585543 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
GFAP-205ENST00000585543 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.78
GFAP-205ENST00000585543 LCE1CQ5T751 118 aa3.88□□□□□ -1.79
GFAP-205ENST00000585543 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
GFAP-205ENST00000585543 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
GFAP-205ENST00000585543 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
GFAP-205ENST00000585543 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
GFAP-205ENST00000585543 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
GFAP-205ENST00000585543 INE1O15225 51 aa3.34□□□□□ -1.87
GFAP-205ENST00000585543 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
GFAP-205ENST00000585543 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
GFAP-205ENST00000585543 H3BS24 57 aa3.26□□□□□ -1.89
GFAP-205ENST00000585543 PRM1P04553 51 aa3.16□□□□□ -1.9
GFAP-205ENST00000585543 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
GFAP-205ENST00000585543 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
GFAP-205ENST00000585543 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
GFAP-205ENST00000585543 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
GFAP-205ENST00000585543 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 54.2 ms