RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
TRIM47-202ENST00000585333 MT1EP04732 61 aa4.75□□□□□ -1.65
TRIM47-202ENST00000585333 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
TRIM47-202ENST00000585333 SPRR2EP22531 72 aa4.68□□□□□ -1.66
TRIM47-202ENST00000585333 SPRR2BP35325 72 aa4.68□□□□□ -1.66
TRIM47-202ENST00000585333 SPRR2AP35326 72 aa4.68□□□□□ -1.66
TRIM47-202ENST00000585333 PRAC1Q96KF2 57 aa4.67□□□□□ -1.66
TRIM47-202ENST00000585333 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.67
TRIM47-202ENST00000585333 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
TRIM47-202ENST00000585333 KRTAP19-3Q7Z4W3 81 aa4.65□□□□□ -1.67
TRIM47-202ENST00000585333 MT1GP13640 62 aa4.63□□□□□ -1.67
TRIM47-202ENST00000585333 KRTAP2-2Q9BYT5 123 aa4.63□□□□□ -1.67
TRIM47-202ENST00000585333 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
TRIM47-202ENST00000585333 MT1LQ93083 61 aa4.61□□□□□ -1.67
TRIM47-202ENST00000585333 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
TRIM47-202ENST00000585333 SVIPQ8NHG7 77 aa4.57□□□□□ -1.68
TRIM47-202ENST00000585333 SPRR2DP22532 72 aa4.53□□□□□ -1.68
TRIM47-202ENST00000585333 MT1MQ8N339 61 aa4.49□□□□□ -1.69
TRIM47-202ENST00000585333 H3BS24 57 aa4.46□□□□□ -1.7
TRIM47-202ENST00000585333 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
TRIM47-202ENST00000585333 LCE3BQ5TA77 95 aa4.42□□□□□ -1.7
TRIM47-202ENST00000585333 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
TRIM47-202ENST00000585333 DSTQ03001 7570 aaKnown RBP4.34□□□□□ -1.72
TRIM47-202ENST00000585333 KRTAP4-7Q9BYR0 210 aa4.3□□□□□ -1.72
TRIM47-202ENST00000585333 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
TRIM47-202ENST00000585333 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
TRIM47-202ENST00000585333 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
TRIM47-202ENST00000585333 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
TRIM47-202ENST00000585333 LCE4AQ5TA78 99 aa4.09□□□□□ -1.75
TRIM47-202ENST00000585333 HMCN1Q96RW7 5635 aa4.08□□□□□ -1.76
TRIM47-202ENST00000585333 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
TRIM47-202ENST00000585333 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
TRIM47-202ENST00000585333 LOC100996750A0A140TA64 210 aa4.05□□□□□ -1.76
TRIM47-202ENST00000585333 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
TRIM47-202ENST00000585333 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
TRIM47-202ENST00000585333 MT1AP04731 61 aa3.97□□□□□ -1.77
TRIM47-202ENST00000585333 MT4P47944 62 aa3.97□□□□□ -1.77
TRIM47-202ENST00000585333 AHNAK2Q8IVF2 5795 aa3.96□□□□□ -1.78
TRIM47-202ENST00000585333 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
TRIM47-202ENST00000585333 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
TRIM47-202ENST00000585333 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
TRIM47-202ENST00000585333 KRTAP4-6Q9BYQ5 205 aa3.84□□□□□ -1.79
TRIM47-202ENST00000585333 KRTAP5-7Q6L8G8 165 aa3.81□□□□□ -1.8
TRIM47-202ENST00000585333 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
TRIM47-202ENST00000585333 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
TRIM47-202ENST00000585333 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
TRIM47-202ENST00000585333 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
TRIM47-202ENST00000585333 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
TRIM47-202ENST00000585333 MT3P25713 68 aa3.65□□□□□ -1.83
TRIM47-202ENST00000585333 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
TRIM47-202ENST00000585333 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
TRIM47-202ENST00000585333 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
TRIM47-202ENST00000585333 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
TRIM47-202ENST00000585333 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
TRIM47-202ENST00000585333 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
TRIM47-202ENST00000585333 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
TRIM47-202ENST00000585333 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
TRIM47-202ENST00000585333 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
TRIM47-202ENST00000585333 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
TRIM47-202ENST00000585333 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
TRIM47-202ENST00000585333 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
TRIM47-202ENST00000585333 KRTAP9-9Q9BYP9 154 aa3.19□□□□□ -1.9
TRIM47-202ENST00000585333 INE1O15225 51 aa3.14□□□□□ -1.91
TRIM47-202ENST00000585333 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
TRIM47-202ENST00000585333 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
TRIM47-202ENST00000585333 LCE1CQ5T751 118 aa3□□□□□ -1.93
TRIM47-202ENST00000585333 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
TRIM47-202ENST00000585333 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
TRIM47-202ENST00000585333 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
TRIM47-202ENST00000585333 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
TRIM47-202ENST00000585333 PRM1P04553 51 aa2.63□□□□□ -1.99
TRIM47-202ENST00000585333 LCE1FQ5T754 118 aa2.54□□□□□ -2
TRIM47-202ENST00000585333 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
TRIM47-202ENST00000585333 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
TRIM47-202ENST00000585333 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
TRIM47-202ENST00000585333 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
TRIM47-202ENST00000585333 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
TRIM47-202ENST00000585333 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 89.7 ms