RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
MKS1-213ENST00000585134 LCE3BQ5TA77 95 aa5.07□□□□□ -1.6
MKS1-213ENST00000585134 ROMO1P60602 79 aa5.06□□□□□ -1.6
MKS1-213ENST00000585134 MT1LQ93083 61 aa5.06□□□□□ -1.6
MKS1-213ENST00000585134 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
MKS1-213ENST00000585134 MT1GP13640 62 aa5.02□□□□□ -1.61
MKS1-213ENST00000585134 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
MKS1-213ENST00000585134 KRTAP2-1Q9BYU5 128 aa5.02□□□□□ -1.61
MKS1-213ENST00000585134 PP632Q6XCG6 107 aa5□□□□□ -1.61
MKS1-213ENST00000585134 MT1MQ8N339 61 aa4.99□□□□□ -1.61
MKS1-213ENST00000585134 BRK1Q8WUW1 75 aa4.96□□□□□ -1.62
MKS1-213ENST00000585134 KRTAP23-1A1A580 65 aa4.93□□□□□ -1.62
MKS1-213ENST00000585134 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
MKS1-213ENST00000585134 DSTQ03001 7570 aaKnown RBP4.86□□□□□ -1.63
MKS1-213ENST00000585134 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
MKS1-213ENST00000585134 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
MKS1-213ENST00000585134 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
MKS1-213ENST00000585134 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
MKS1-213ENST00000585134 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
MKS1-213ENST00000585134 PMAIP1Q13794 54 aa4.63□□□□□ -1.67
MKS1-213ENST00000585134 LCE4AQ5TA78 99 aa4.61□□□□□ -1.67
MKS1-213ENST00000585134 MT4P47944 62 aa4.59□□□□□ -1.67
MKS1-213ENST00000585134 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
MKS1-213ENST00000585134 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
MKS1-213ENST00000585134 KRTAP5-4Q6L8H1 288 aa4.55□□□□□ -1.68
MKS1-213ENST00000585134 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
MKS1-213ENST00000585134 KRTAP5-5Q701N2 237 aaPredicted RBP4.5□□□□□ -1.69
MKS1-213ENST00000585134 PRO0628Q9UI54 55 aa4.49□□□□□ -1.69
MKS1-213ENST00000585134 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
MKS1-213ENST00000585134 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
MKS1-213ENST00000585134 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
MKS1-213ENST00000585134 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
MKS1-213ENST00000585134 GPR98Q8WXG9 6306 aa4.33□□□□□ -1.72
MKS1-213ENST00000585134 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
MKS1-213ENST00000585134 AHNAK2Q8IVF2 5795 aa4.32□□□□□ -1.72
MKS1-213ENST00000585134 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
MKS1-213ENST00000585134 MT1AP04731 61 aa4.31□□□□□ -1.72
MKS1-213ENST00000585134 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
MKS1-213ENST00000585134 KRTAP6-1Q3LI64 71 aa4.28□□□□□ -1.72
MKS1-213ENST00000585134 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
MKS1-213ENST00000585134 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
MKS1-213ENST00000585134 SVIPQ8NHG7 77 aa4.14□□□□□ -1.75
MKS1-213ENST00000585134 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
MKS1-213ENST00000585134 KRTAP5-10Q6L8G5 202 aa4.08□□□□□ -1.76
MKS1-213ENST00000585134 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
MKS1-213ENST00000585134 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
MKS1-213ENST00000585134 MT3P25713 68 aa3.92□□□□□ -1.78
MKS1-213ENST00000585134 KRTAP5-7Q6L8G8 165 aa3.88□□□□□ -1.79
MKS1-213ENST00000585134 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
MKS1-213ENST00000585134 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
MKS1-213ENST00000585134 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
MKS1-213ENST00000585134 OBSCNQ5VST9 7968 aa3.68□□□□□ -1.82
MKS1-213ENST00000585134 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
MKS1-213ENST00000585134 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
MKS1-213ENST00000585134 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
MKS1-213ENST00000585134 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
MKS1-213ENST00000585134 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
MKS1-213ENST00000585134 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
MKS1-213ENST00000585134 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
MKS1-213ENST00000585134 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
MKS1-213ENST00000585134 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
MKS1-213ENST00000585134 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
MKS1-213ENST00000585134 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
MKS1-213ENST00000585134 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
MKS1-213ENST00000585134 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
MKS1-213ENST00000585134 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
MKS1-213ENST00000585134 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
MKS1-213ENST00000585134 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
MKS1-213ENST00000585134 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
MKS1-213ENST00000585134 H3BS24 57 aa2.74□□□□□ -1.97
MKS1-213ENST00000585134 A0A0A0MQY5 61 aa2.65□□□□□ -1.99
MKS1-213ENST00000585134 PRM1P04553 51 aa2.63□□□□□ -1.99
MKS1-213ENST00000585134 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
MKS1-213ENST00000585134 INE1O15225 51 aa2.57□□□□□ -2
MKS1-213ENST00000585134 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
MKS1-213ENST00000585134 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
MKS1-213ENST00000585134 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
MKS1-213ENST00000585134 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 97.3 ms