RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 M0QZ58 72 aa4.2□□□□□ -1.74
CASC3-210ENST00000584997 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
CASC3-210ENST00000584997 LINC01554Q52M75 96 aa4.17□□□□□ -1.74
CASC3-210ENST00000584997 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
CASC3-210ENST00000584997 A0A0D9SG42 100 aa4.15□□□□□ -1.75
CASC3-210ENST00000584997 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
CASC3-210ENST00000584997 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
CASC3-210ENST00000584997 KRTAP12-1P59990 96 aa4.1□□□□□ -1.75
CASC3-210ENST00000584997 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
CASC3-210ENST00000584997 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
CASC3-210ENST00000584997 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
CASC3-210ENST00000584997 SPINT4Q6UDR6 99 aa4.01□□□□□ -1.77
CASC3-210ENST00000584997 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
CASC3-210ENST00000584997 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
CASC3-210ENST00000584997 K7ERS5 55 aa3.93□□□□□ -1.78
CASC3-210ENST00000584997 KRTAP19-3Q7Z4W3 81 aa3.92□□□□□ -1.78
CASC3-210ENST00000584997 SPRR5A0A1B0GTR4 108 aa3.91□□□□□ -1.78
CASC3-210ENST00000584997 C10orf95Q9H7T3 257 aa3.91□□□□□ -1.78
CASC3-210ENST00000584997 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
CASC3-210ENST00000584997 MT1EP04732 61 aa3.88□□□□□ -1.79
CASC3-210ENST00000584997 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
CASC3-210ENST00000584997 KRTAP4-7Q9BYR0 210 aa3.88□□□□□ -1.79
CASC3-210ENST00000584997 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
CASC3-210ENST00000584997 PRAC1Q96KF2 57 aa3.86□□□□□ -1.79
CASC3-210ENST00000584997 ROMO1P60602 79 aa3.85□□□□□ -1.79
CASC3-210ENST00000584997 MT4P47944 62 aa3.84□□□□□ -1.79
CASC3-210ENST00000584997 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.79
CASC3-210ENST00000584997 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
CASC3-210ENST00000584997 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
CASC3-210ENST00000584997 MT1GP13640 62 aa3.79□□□□□ -1.8
CASC3-210ENST00000584997 KRTAP5-7Q6L8G8 165 aa3.79□□□□□ -1.8
CASC3-210ENST00000584997 PP632Q6XCG6 107 aa3.79□□□□□ -1.8
CASC3-210ENST00000584997 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
CASC3-210ENST00000584997 MT1MQ8N339 61 aa3.72□□□□□ -1.81
CASC3-210ENST00000584997 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
CASC3-210ENST00000584997 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
CASC3-210ENST00000584997 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
CASC3-210ENST00000584997 MT1LQ93083 61 aa3.67□□□□□ -1.82
CASC3-210ENST00000584997 TNP1P09430 55 aa3.65□□□□□ -1.83
CASC3-210ENST00000584997 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
CASC3-210ENST00000584997 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
CASC3-210ENST00000584997 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
CASC3-210ENST00000584997 AHNAKQ09666 5890 aaKnown RBP3.53□□□□□ -1.84
CASC3-210ENST00000584997 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
CASC3-210ENST00000584997 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
CASC3-210ENST00000584997 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
CASC3-210ENST00000584997 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
CASC3-210ENST00000584997 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.87
CASC3-210ENST00000584997 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.87
CASC3-210ENST00000584997 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
CASC3-210ENST00000584997 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
CASC3-210ENST00000584997 MT3P25713 68 aa3.32□□□□□ -1.88
CASC3-210ENST00000584997 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
CASC3-210ENST00000584997 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
CASC3-210ENST00000584997 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
CASC3-210ENST00000584997 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
CASC3-210ENST00000584997 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.91
CASC3-210ENST00000584997 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
CASC3-210ENST00000584997 MT1AP04731 61 aa3.13□□□□□ -1.91
CASC3-210ENST00000584997 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
CASC3-210ENST00000584997 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
CASC3-210ENST00000584997 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
CASC3-210ENST00000584997 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
CASC3-210ENST00000584997 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
CASC3-210ENST00000584997 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
CASC3-210ENST00000584997 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
CASC3-210ENST00000584997 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
CASC3-210ENST00000584997 INE1O15225 51 aa2.57□□□□□ -2
CASC3-210ENST00000584997 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
CASC3-210ENST00000584997 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
CASC3-210ENST00000584997 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
CASC3-210ENST00000584997 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
CASC3-210ENST00000584997 PRM1P04553 51 aa2.05□□□□□ -2.08
CASC3-210ENST00000584997 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
CASC3-210ENST00000584997 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
CASC3-210ENST00000584997 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
CASC3-210ENST00000584997 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
CASC3-210ENST00000584997 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 187.3 ms