RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 LCE3AQ5TA76 89 aa5.91□□□□□ -1.46
ERBB2-222ENST00000584908 MT1GP13640 62 aa5.85□□□□□ -1.47
ERBB2-222ENST00000584908 K7ERS5 55 aa5.81□□□□□ -1.48
ERBB2-222ENST00000584908 MT1LQ93083 61 aa5.81□□□□□ -1.48
ERBB2-222ENST00000584908 PP632Q6XCG6 107 aa5.78□□□□□ -1.48
ERBB2-222ENST00000584908 KRTAP25-1Q3LHN0 102 aa5.76□□□□□ -1.49
ERBB2-222ENST00000584908 DSTQ03001 7570 aaKnown RBP5.75□□□□□ -1.49
ERBB2-222ENST00000584908 MT1MQ8N339 61 aa5.74□□□□□ -1.49
ERBB2-222ENST00000584908 CDC42SE1Q9NRR8 79 aa5.71□□□□□ -1.5
ERBB2-222ENST00000584908 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
ERBB2-222ENST00000584908 SVIPQ8NHG7 77 aa5.68□□□□□ -1.5
ERBB2-222ENST00000584908 BRK1Q8WUW1 75 aa5.66□□□□□ -1.5
ERBB2-222ENST00000584908 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
ERBB2-222ENST00000584908 KRTAP4-3Q9BYR4 195 aa5.56□□□□□ -1.52
ERBB2-222ENST00000584908 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
ERBB2-222ENST00000584908 KRTAP19-4Q3LI73 84 aa5.48□□□□□ -1.53
ERBB2-222ENST00000584908 ROMO1P60602 79 aa5.47□□□□□ -1.53
ERBB2-222ENST00000584908 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
ERBB2-222ENST00000584908 LCE4AQ5TA78 99 aa5.46□□□□□ -1.54
ERBB2-222ENST00000584908 KRTAP5-4Q6L8H1 288 aa5.43□□□□□ -1.54
ERBB2-222ENST00000584908 LCE1DQ5T752 114 aa5.4□□□□□ -1.55
ERBB2-222ENST00000584908 KRTAP15-1Q3LI76 137 aa5.39□□□□□ -1.55
ERBB2-222ENST00000584908 PMAIP1Q13794 54 aa5.35□□□□□ -1.55
ERBB2-222ENST00000584908 PRO0628Q9UI54 55 aa5.35□□□□□ -1.55
ERBB2-222ENST00000584908 HMCN1Q96RW7 5635 aa5.33□□□□□ -1.56
ERBB2-222ENST00000584908 MT4P47944 62 aa5.31□□□□□ -1.56
ERBB2-222ENST00000584908 KRTAP5-5Q701N2 237 aaPredicted RBP5.29□□□□□ -1.56
ERBB2-222ENST00000584908 LCE3CQ5T5A8 94 aa5.27□□□□□ -1.57
ERBB2-222ENST00000584908 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
ERBB2-222ENST00000584908 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
ERBB2-222ENST00000584908 GPR98Q8WXG9 6306 aa5.09□□□□□ -1.59
ERBB2-222ENST00000584908 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
ERBB2-222ENST00000584908 KRTAP20-2Q3LI61 65 aa5.07□□□□□ -1.6
ERBB2-222ENST00000584908 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
ERBB2-222ENST00000584908 AHNAK2Q8IVF2 5795 aa5.04□□□□□ -1.6
ERBB2-222ENST00000584908 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
ERBB2-222ENST00000584908 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
ERBB2-222ENST00000584908 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
ERBB2-222ENST00000584908 KRTAP5-10Q6L8G5 202 aa4.97□□□□□ -1.61
ERBB2-222ENST00000584908 MT1AP04731 61 aa4.95□□□□□ -1.62
ERBB2-222ENST00000584908 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
ERBB2-222ENST00000584908 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
ERBB2-222ENST00000584908 KRTAP6-1Q3LI64 71 aa4.9□□□□□ -1.63
ERBB2-222ENST00000584908 KRTAP5-2Q701N4 177 aa4.78□□□□□ -1.64
ERBB2-222ENST00000584908 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
ERBB2-222ENST00000584908 KRTAP5-7Q6L8G8 165 aa4.74□□□□□ -1.65
ERBB2-222ENST00000584908 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
ERBB2-222ENST00000584908 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
ERBB2-222ENST00000584908 MT3P25713 68 aa4.51□□□□□ -1.69
ERBB2-222ENST00000584908 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
ERBB2-222ENST00000584908 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
ERBB2-222ENST00000584908 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
ERBB2-222ENST00000584908 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
ERBB2-222ENST00000584908 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
ERBB2-222ENST00000584908 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.74
ERBB2-222ENST00000584908 MUC5ACP98088 5654 aa4.14□□□□□ -1.75
ERBB2-222ENST00000584908 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
ERBB2-222ENST00000584908 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
ERBB2-222ENST00000584908 H3BS24 57 aa3.92□□□□□ -1.78
ERBB2-222ENST00000584908 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
ERBB2-222ENST00000584908 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
ERBB2-222ENST00000584908 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
ERBB2-222ENST00000584908 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
ERBB2-222ENST00000584908 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
ERBB2-222ENST00000584908 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
ERBB2-222ENST00000584908 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
ERBB2-222ENST00000584908 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.85
ERBB2-222ENST00000584908 A0A0A0MQY5 61 aa3.44□□□□□ -1.86
ERBB2-222ENST00000584908 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
ERBB2-222ENST00000584908 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
ERBB2-222ENST00000584908 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
ERBB2-222ENST00000584908 INE1O15225 51 aa3.22□□□□□ -1.89
ERBB2-222ENST00000584908 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
ERBB2-222ENST00000584908 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
ERBB2-222ENST00000584908 PRM1P04553 51 aa2.79□□□□□ -1.96
ERBB2-222ENST00000584908 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
ERBB2-222ENST00000584908 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
ERBB2-222ENST00000584908 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 29.8 ms