RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
GGA3-219ENST00000584550 SPINT4Q6UDR6 99 aa4□□□□□ -1.77
GGA3-219ENST00000584550 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
GGA3-219ENST00000584550 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
GGA3-219ENST00000584550 MT4P47944 62 aa3.95□□□□□ -1.78
GGA3-219ENST00000584550 KRTAP12-1P59990 96 aa3.93□□□□□ -1.78
GGA3-219ENST00000584550 AHNAK2Q8IVF2 5795 aa3.92□□□□□ -1.78
GGA3-219ENST00000584550 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
GGA3-219ENST00000584550 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
GGA3-219ENST00000584550 K7ERS5 55 aa3.9□□□□□ -1.79
GGA3-219ENST00000584550 KRTAP25-1Q3LHN0 102 aa3.85□□□□□ -1.79
GGA3-219ENST00000584550 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
GGA3-219ENST00000584550 KRTAP19-3Q7Z4W3 81 aa3.84□□□□□ -1.79
GGA3-219ENST00000584550 KRTAP5-7Q6L8G8 165 aa3.81□□□□□ -1.8
GGA3-219ENST00000584550 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
GGA3-219ENST00000584550 MT1EP04732 61 aa3.79□□□□□ -1.8
GGA3-219ENST00000584550 KRTAP4-6Q9BYQ5 205 aa3.78□□□□□ -1.8
GGA3-219ENST00000584550 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
GGA3-219ENST00000584550 ROMO1P60602 79 aa3.77□□□□□ -1.81
GGA3-219ENST00000584550 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
GGA3-219ENST00000584550 TNP1P09430 55 aa3.73□□□□□ -1.81
GGA3-219ENST00000584550 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
GGA3-219ENST00000584550 MT1GP13640 62 aa3.69□□□□□ -1.82
GGA3-219ENST00000584550 KRTAP19-5Q3LI72 72 aa3.69□□□□□ -1.82
GGA3-219ENST00000584550 KRTAP5-4Q6L8H1 288 aa3.69□□□□□ -1.82
GGA3-219ENST00000584550 LCE3AQ5TA76 89 aa3.67□□□□□ -1.82
GGA3-219ENST00000584550 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
GGA3-219ENST00000584550 H3BS24 57 aa3.65□□□□□ -1.83
GGA3-219ENST00000584550 MT1MQ8N339 61 aa3.64□□□□□ -1.83
GGA3-219ENST00000584550 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
GGA3-219ENST00000584550 MT1LQ93083 61 aa3.55□□□□□ -1.84
GGA3-219ENST00000584550 KRTAP20-2Q3LI61 65 aa3.54□□□□□ -1.84
GGA3-219ENST00000584550 KRTAP12-3P60328 96 aa3.52□□□□□ -1.85
GGA3-219ENST00000584550 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
GGA3-219ENST00000584550 KRTAP4-7Q9BYR0 210 aa3.42□□□□□ -1.86
GGA3-219ENST00000584550 KRTAP23-1A1A580 65 aa3.39□□□□□ -1.87
GGA3-219ENST00000584550 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
GGA3-219ENST00000584550 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
GGA3-219ENST00000584550 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
GGA3-219ENST00000584550 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.87
GGA3-219ENST00000584550 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
GGA3-219ENST00000584550 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
GGA3-219ENST00000584550 SYNE1Q8NF91 8797 aaKnown RBP3.32□□□□□ -1.88
GGA3-219ENST00000584550 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
GGA3-219ENST00000584550 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
GGA3-219ENST00000584550 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
GGA3-219ENST00000584550 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
GGA3-219ENST00000584550 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
GGA3-219ENST00000584550 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
GGA3-219ENST00000584550 KRTAP5-2Q701N4 177 aa3.15□□□□□ -1.91
GGA3-219ENST00000584550 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.91
GGA3-219ENST00000584550 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
GGA3-219ENST00000584550 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
GGA3-219ENST00000584550 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
GGA3-219ENST00000584550 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
GGA3-219ENST00000584550 MT1AP04731 61 aa3.01□□□□□ -1.93
GGA3-219ENST00000584550 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
GGA3-219ENST00000584550 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
GGA3-219ENST00000584550 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
GGA3-219ENST00000584550 INE1O15225 51 aa2.9□□□□□ -1.95
GGA3-219ENST00000584550 MT3P25713 68 aa2.76□□□□□ -1.97
GGA3-219ENST00000584550 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
GGA3-219ENST00000584550 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
GGA3-219ENST00000584550 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
GGA3-219ENST00000584550 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
GGA3-219ENST00000584550 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
GGA3-219ENST00000584550 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
GGA3-219ENST00000584550 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
GGA3-219ENST00000584550 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
GGA3-219ENST00000584550 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
GGA3-219ENST00000584550 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
GGA3-219ENST00000584550 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
GGA3-219ENST00000584550 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
GGA3-219ENST00000584550 PRM1P04553 51 aa1.97□□□□□ -2.09
GGA3-219ENST00000584550 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
GGA3-219ENST00000584550 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
GGA3-219ENST00000584550 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
GGA3-219ENST00000584550 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 237.4 ms