RNA–Protein interactions for RNA: ENST00000584340.1

PSMD11-210, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 4

Gene PSMD11, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-210ENST00000584340 SPRR2BP35325 72 aa4.03□□□□□ -1.76
PSMD11-210ENST00000584340 SPRR2AP35326 72 aa4.03□□□□□ -1.76
PSMD11-210ENST00000584340 MT1EP04732 61 aa4□□□□□ -1.77
PSMD11-210ENST00000584340 KRTAP19-5Q3LI72 72 aa3.97□□□□□ -1.77
PSMD11-210ENST00000584340 LCE3AQ5TA76 89 aa3.96□□□□□ -1.78
PSMD11-210ENST00000584340 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
PSMD11-210ENST00000584340 TNP1P09430 55 aa3.95□□□□□ -1.78
PSMD11-210ENST00000584340 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
PSMD11-210ENST00000584340 SVIPQ8NHG7 77 aa3.92□□□□□ -1.78
PSMD11-210ENST00000584340 A6NED7 52 aa3.91□□□□□ -1.78
PSMD11-210ENST00000584340 KRTAP2-3P0C7H8 128 aa3.91□□□□□ -1.78
PSMD11-210ENST00000584340 KRTAP2-4Q9BYR9 128 aa3.91□□□□□ -1.78
PSMD11-210ENST00000584340 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
PSMD11-210ENST00000584340 SPRR2DP22532 72 aa3.89□□□□□ -1.79
PSMD11-210ENST00000584340 MT1LQ93083 61 aa3.86□□□□□ -1.79
PSMD11-210ENST00000584340 CDC42SE1Q9NRR8 79 aa3.85□□□□□ -1.79
PSMD11-210ENST00000584340 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
PSMD11-210ENST00000584340 PRO0628Q9UI54 55 aa3.84□□□□□ -1.79
PSMD11-210ENST00000584340 MT1GP13640 62 aa3.83□□□□□ -1.8
PSMD11-210ENST00000584340 K7ERS5 55 aa3.82□□□□□ -1.8
PSMD11-210ENST00000584340 KRTAP15-1Q3LI76 137 aa3.81□□□□□ -1.8
PSMD11-210ENST00000584340 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
PSMD11-210ENST00000584340 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
PSMD11-210ENST00000584340 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
PSMD11-210ENST00000584340 MT1MQ8N339 61 aa3.79□□□□□ -1.8
PSMD11-210ENST00000584340 BRK1Q8WUW1 75 aa3.79□□□□□ -1.8
PSMD11-210ENST00000584340 KRTAP4-3Q9BYR4 195 aa3.73□□□□□ -1.81
PSMD11-210ENST00000584340 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
PSMD11-210ENST00000584340 ROMO1P60602 79 aa3.72□□□□□ -1.81
PSMD11-210ENST00000584340 PP632Q6XCG6 107 aa3.69□□□□□ -1.82
PSMD11-210ENST00000584340 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
PSMD11-210ENST00000584340 PMAIP1Q13794 54 aa3.62□□□□□ -1.83
PSMD11-210ENST00000584340 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
PSMD11-210ENST00000584340 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
PSMD11-210ENST00000584340 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
PSMD11-210ENST00000584340 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
PSMD11-210ENST00000584340 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
PSMD11-210ENST00000584340 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.86
PSMD11-210ENST00000584340 MT4P47944 62 aa3.39□□□□□ -1.87
PSMD11-210ENST00000584340 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
PSMD11-210ENST00000584340 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
PSMD11-210ENST00000584340 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
PSMD11-210ENST00000584340 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
PSMD11-210ENST00000584340 MT1AP04731 61 aa3.26□□□□□ -1.89
PSMD11-210ENST00000584340 KRTAP6-1Q3LI64 71 aa3.26□□□□□ -1.89
PSMD11-210ENST00000584340 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
PSMD11-210ENST00000584340 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
PSMD11-210ENST00000584340 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
PSMD11-210ENST00000584340 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
PSMD11-210ENST00000584340 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
PSMD11-210ENST00000584340 A0A0A0MQY5 61 aa3.06□□□□□ -1.92
PSMD11-210ENST00000584340 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
PSMD11-210ENST00000584340 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
PSMD11-210ENST00000584340 MT3P25713 68 aa2.93□□□□□ -1.94
PSMD11-210ENST00000584340 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
PSMD11-210ENST00000584340 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
PSMD11-210ENST00000584340 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
PSMD11-210ENST00000584340 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
PSMD11-210ENST00000584340 LUZP6Q538Z0 58 aa2.79□□□□□ -1.96
PSMD11-210ENST00000584340 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
PSMD11-210ENST00000584340 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
PSMD11-210ENST00000584340 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
PSMD11-210ENST00000584340 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
PSMD11-210ENST00000584340 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
PSMD11-210ENST00000584340 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -2
PSMD11-210ENST00000584340 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
PSMD11-210ENST00000584340 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
PSMD11-210ENST00000584340 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
PSMD11-210ENST00000584340 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
PSMD11-210ENST00000584340 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
PSMD11-210ENST00000584340 INE1O15225 51 aa2.37□□□□□ -2.03
PSMD11-210ENST00000584340 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
PSMD11-210ENST00000584340 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
PSMD11-210ENST00000584340 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
PSMD11-210ENST00000584340 PRM1P04553 51 aa1.93□□□□□ -2.1
PSMD11-210ENST00000584340 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
PSMD11-210ENST00000584340 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
PSMD11-210ENST00000584340 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 157.9 ms