RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 GPR98Q8WXG9 6306 aa6.17□□□□□ -1.42
SKA2-209ENST00000583976 KRTAP4-11Q9BYQ6 195 aa6.13□□□□□ -1.43
SKA2-209ENST00000583976 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
SKA2-209ENST00000583976 MIR22HGQ0VDD5 57 aa6.08□□□□□ -1.44
SKA2-209ENST00000583976 DSTQ03001 7570 aaKnown RBP6.07□□□□□ -1.44
SKA2-209ENST00000583976 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
SKA2-209ENST00000583976 A6NED7 52 aa5.96□□□□□ -1.46
SKA2-209ENST00000583976 C10orf95Q9H7T3 257 aa5.94□□□□□ -1.46
SKA2-209ENST00000583976 KRTAP19-7Q3SYF9 63 aa5.9□□□□□ -1.46
SKA2-209ENST00000583976 K7ERS5 55 aa5.89□□□□□ -1.47
SKA2-209ENST00000583976 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
SKA2-209ENST00000583976 MT1EP04732 61 aa5.86□□□□□ -1.47
SKA2-209ENST00000583976 TNP1P09430 55 aa5.85□□□□□ -1.47
SKA2-209ENST00000583976 KRTAP19-3Q7Z4W3 81 aa5.84□□□□□ -1.47
SKA2-209ENST00000583976 LCE4AQ5TA78 99 aa5.81□□□□□ -1.48
SKA2-209ENST00000583976 HMCN1Q96RW7 5635 aa5.75□□□□□ -1.49
SKA2-209ENST00000583976 LCE3AQ5TA76 89 aa5.73□□□□□ -1.49
SKA2-209ENST00000583976 CDC42SE1Q9NRR8 79 aa5.73□□□□□ -1.49
SKA2-209ENST00000583976 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
SKA2-209ENST00000583976 AHNAK2Q8IVF2 5795 aa5.67□□□□□ -1.5
SKA2-209ENST00000583976 MT4P47944 62 aa5.66□□□□□ -1.5
SKA2-209ENST00000583976 KRTAP25-1Q3LHN0 102 aa5.65□□□□□ -1.5
SKA2-209ENST00000583976 MT1GP13640 62 aa5.61□□□□□ -1.51
SKA2-209ENST00000583976 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
SKA2-209ENST00000583976 MT1MQ8N339 61 aa5.6□□□□□ -1.51
SKA2-209ENST00000583976 ROMO1P60602 79 aa5.55□□□□□ -1.52
SKA2-209ENST00000583976 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
SKA2-209ENST00000583976 MT1LQ93083 61 aa5.54□□□□□ -1.52
SKA2-209ENST00000583976 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
SKA2-209ENST00000583976 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
SKA2-209ENST00000583976 KRTAP5-10Q6L8G5 202 aa5.48□□□□□ -1.53
SKA2-209ENST00000583976 BRK1Q8WUW1 75 aa5.48□□□□□ -1.53
SKA2-209ENST00000583976 KRTAP5-4Q6L8H1 288 aa5.47□□□□□ -1.53
SKA2-209ENST00000583976 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
SKA2-209ENST00000583976 KRTAP5-7Q6L8G8 165 aa5.28□□□□□ -1.56
SKA2-209ENST00000583976 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
SKA2-209ENST00000583976 KRTAP20-2Q3LI61 65 aa5.21□□□□□ -1.58
SKA2-209ENST00000583976 PMAIP1Q13794 54 aa5.16□□□□□ -1.58
SKA2-209ENST00000583976 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
SKA2-209ENST00000583976 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.59
SKA2-209ENST00000583976 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
SKA2-209ENST00000583976 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
SKA2-209ENST00000583976 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
SKA2-209ENST00000583976 PRO0628Q9UI54 55 aa5.01□□□□□ -1.61
SKA2-209ENST00000583976 PRAC1Q96KF2 57 aa4.93□□□□□ -1.62
SKA2-209ENST00000583976 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
SKA2-209ENST00000583976 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
SKA2-209ENST00000583976 SVIPQ8NHG7 77 aa4.77□□□□□ -1.65
SKA2-209ENST00000583976 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
SKA2-209ENST00000583976 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
SKA2-209ENST00000583976 AHNAKQ09666 5890 aaKnown RBP4.72□□□□□ -1.65
SKA2-209ENST00000583976 MT1AP04731 61 aa4.69□□□□□ -1.66
SKA2-209ENST00000583976 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
SKA2-209ENST00000583976 MUC5BQ9HC84 5762 aaPredicted RBP4.68□□□□□ -1.66
SKA2-209ENST00000583976 KRTAP5-8O75690 187 aa4.67□□□□□ -1.66
SKA2-209ENST00000583976 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
SKA2-209ENST00000583976 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
SKA2-209ENST00000583976 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
SKA2-209ENST00000583976 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
SKA2-209ENST00000583976 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
SKA2-209ENST00000583976 MT3P25713 68 aa4.25□□□□□ -1.73
SKA2-209ENST00000583976 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
SKA2-209ENST00000583976 LUZP6Q538Z0 58 aa4.07□□□□□ -1.76
SKA2-209ENST00000583976 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
SKA2-209ENST00000583976 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
SKA2-209ENST00000583976 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
SKA2-209ENST00000583976 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
SKA2-209ENST00000583976 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
SKA2-209ENST00000583976 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
SKA2-209ENST00000583976 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
SKA2-209ENST00000583976 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
SKA2-209ENST00000583976 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
SKA2-209ENST00000583976 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
SKA2-209ENST00000583976 INE1O15225 51 aa2.89□□□□□ -1.95
SKA2-209ENST00000583976 PRM1P04553 51 aa2.88□□□□□ -1.95
SKA2-209ENST00000583976 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
SKA2-209ENST00000583976 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
SKA2-209ENST00000583976 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 9.1 ms