RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 LUZP6Q538Z0 58 aa4.24□□□□□ -1.73
MKS1-212ENST00000583577 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
MKS1-212ENST00000583577 MT1BP07438 61 aa4.21□□□□□ -1.74
MKS1-212ENST00000583577 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
MKS1-212ENST00000583577 DSTQ03001 7570 aaKnown RBP4.18□□□□□ -1.74
MKS1-212ENST00000583577 LCE3BQ5TA77 95 aa4.17□□□□□ -1.74
MKS1-212ENST00000583577 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
MKS1-212ENST00000583577 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
MKS1-212ENST00000583577 HMCN1Q96RW7 5635 aa4.11□□□□□ -1.75
MKS1-212ENST00000583577 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
MKS1-212ENST00000583577 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
MKS1-212ENST00000583577 KRTAP8-1Q8IUC2 63 aa4.07□□□□□ -1.76
MKS1-212ENST00000583577 PRO2289Q9P1D8 64 aa4.04□□□□□ -1.76
MKS1-212ENST00000583577 MT1XP80297 61 aa3.98□□□□□ -1.77
MKS1-212ENST00000583577 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
MKS1-212ENST00000583577 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
MKS1-212ENST00000583577 KRTAP4-8A0A0G2JLE6 195 aa3.87□□□□□ -1.79
MKS1-212ENST00000583577 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
MKS1-212ENST00000583577 KRTAP4-8Q9BYQ9 185 aa3.87□□□□□ -1.79
MKS1-212ENST00000583577 KRTAP5-7Q6L8G8 165 aa3.82□□□□□ -1.8
MKS1-212ENST00000583577 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
MKS1-212ENST00000583577 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
MKS1-212ENST00000583577 INE1O15225 51 aa3.78□□□□□ -1.8
MKS1-212ENST00000583577 MT4P47944 62 aa3.78□□□□□ -1.8
MKS1-212ENST00000583577 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
MKS1-212ENST00000583577 KRTAP19-4Q3LI73 84 aa3.75□□□□□ -1.81
MKS1-212ENST00000583577 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
MKS1-212ENST00000583577 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
MKS1-212ENST00000583577 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.83
MKS1-212ENST00000583577 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
MKS1-212ENST00000583577 KRTAP4-6Q9BYQ5 205 aa3.59□□□□□ -1.83
MKS1-212ENST00000583577 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
MKS1-212ENST00000583577 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
MKS1-212ENST00000583577 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
MKS1-212ENST00000583577 MT1EP04732 61 aa3.52□□□□□ -1.85
MKS1-212ENST00000583577 KRTAP19-3Q7Z4W3 81 aa3.5□□□□□ -1.85
MKS1-212ENST00000583577 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
MKS1-212ENST00000583577 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
MKS1-212ENST00000583577 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
MKS1-212ENST00000583577 MT1GP13640 62 aa3.41□□□□□ -1.86
MKS1-212ENST00000583577 MT1LQ93083 61 aa3.4□□□□□ -1.87
MKS1-212ENST00000583577 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
MKS1-212ENST00000583577 MT1MQ8N339 61 aa3.34□□□□□ -1.87
MKS1-212ENST00000583577 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
MKS1-212ENST00000583577 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
MKS1-212ENST00000583577 KRTAP4-7Q9BYR0 210 aa3.26□□□□□ -1.89
MKS1-212ENST00000583577 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
MKS1-212ENST00000583577 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
MKS1-212ENST00000583577 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
MKS1-212ENST00000583577 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
MKS1-212ENST00000583577 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
MKS1-212ENST00000583577 LOC100996750A0A140TA64 210 aa3.05□□□□□ -1.92
MKS1-212ENST00000583577 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
MKS1-212ENST00000583577 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
MKS1-212ENST00000583577 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
MKS1-212ENST00000583577 MT1AP04731 61 aa2.96□□□□□ -1.94
MKS1-212ENST00000583577 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
MKS1-212ENST00000583577 KRTAP9-4Q9BYQ2 154 aa2.78□□□□□ -1.96
MKS1-212ENST00000583577 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
MKS1-212ENST00000583577 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
MKS1-212ENST00000583577 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
MKS1-212ENST00000583577 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
MKS1-212ENST00000583577 MT3P25713 68 aa2.66□□□□□ -1.98
MKS1-212ENST00000583577 PRM1P04553 51 aa2.53□□□□□ -2
MKS1-212ENST00000583577 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
MKS1-212ENST00000583577 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
MKS1-212ENST00000583577 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
MKS1-212ENST00000583577 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
MKS1-212ENST00000583577 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
MKS1-212ENST00000583577 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
MKS1-212ENST00000583577 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
MKS1-212ENST00000583577 LCE1FQ5T754 118 aa2.14□□□□□ -2.07
MKS1-212ENST00000583577 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
MKS1-212ENST00000583577 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.1
MKS1-212ENST00000583577 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
MKS1-212ENST00000583577 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
MKS1-212ENST00000583577 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
MKS1-212ENST00000583577 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 49.5 ms