RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 KRTAP25-1Q3LHN0 102 aa7.15□□□□□ -1.26
SNX11-212ENST00000583320 TNP1P09430 55 aa7.14□□□□□ -1.27
SNX11-212ENST00000583320 DSTQ03001 7570 aaKnown RBP7.11□□□□□ -1.27
SNX11-212ENST00000583320 KTN1-AS1Q86SY8 53 aa7.08□□□□□ -1.28
SNX11-212ENST00000583320 KRTAP4-9Q9BYQ8 210 aa7.01□□□□□ -1.29
SNX11-212ENST00000583320 KRTAP10-7P60409 375 aaPredicted RBP6.98□□□□□ -1.29
SNX11-212ENST00000583320 KRTAP10-12P60413 245 aa6.98□□□□□ -1.29
SNX11-212ENST00000583320 KRTAP23-1A1A580 65 aa6.96□□□□□ -1.3
SNX11-212ENST00000583320 PP632Q6XCG6 107 aa6.89□□□□□ -1.31
SNX11-212ENST00000583320 PRAC1Q96KF2 57 aa6.89□□□□□ -1.31
SNX11-212ENST00000583320 HMCN1Q96RW7 5635 aa6.82□□□□□ -1.32
SNX11-212ENST00000583320 LCE3AQ5TA76 89 aa6.8□□□□□ -1.32
SNX11-212ENST00000583320 LCE1DQ5T752 114 aa6.75□□□□□ -1.33
SNX11-212ENST00000583320 AHNAK2Q8IVF2 5795 aa6.73□□□□□ -1.33
SNX11-212ENST00000583320 LCE5AQ5TCM9 118 aa6.65□□□□□ -1.34
SNX11-212ENST00000583320 KRTAP5-10Q6L8G5 202 aa6.61□□□□□ -1.35
SNX11-212ENST00000583320 MT4P47944 62 aa6.58□□□□□ -1.36
SNX11-212ENST00000583320 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
SNX11-212ENST00000583320 KRTAP19-5Q3LI72 72 aa6.57□□□□□ -1.36
SNX11-212ENST00000583320 KRTAP19-7Q3SYF9 63 aa6.54□□□□□ -1.36
SNX11-212ENST00000583320 KRTAP19-3Q7Z4W3 81 aa6.52□□□□□ -1.37
SNX11-212ENST00000583320 MT1EP04732 61 aa6.48□□□□□ -1.37
SNX11-212ENST00000583320 LCE4AQ5TA78 99 aa6.48□□□□□ -1.37
SNX11-212ENST00000583320 KRTAP15-1Q3LI76 137 aa6.42□□□□□ -1.38
SNX11-212ENST00000583320 KRTAP5-7Q6L8G8 165 aa6.42□□□□□ -1.38
SNX11-212ENST00000583320 KRTAP4-6Q9BYQ5 205 aa6.35□□□□□ -1.39
SNX11-212ENST00000583320 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.39
SNX11-212ENST00000583320 KRTAP5-4Q6L8H1 288 aa6.3□□□□□ -1.4
SNX11-212ENST00000583320 KRTAP5-3Q6L8H2 238 aa6.29□□□□□ -1.4
SNX11-212ENST00000583320 MT1LQ93083 61 aa6.29□□□□□ -1.4
SNX11-212ENST00000583320 MT1GP13640 62 aa6.26□□□□□ -1.41
SNX11-212ENST00000583320 MT1MQ8N339 61 aa6.21□□□□□ -1.42
SNX11-212ENST00000583320 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
SNX11-212ENST00000583320 KRTAP4-3Q9BYR4 195 aa6.16□□□□□ -1.42
SNX11-212ENST00000583320 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
SNX11-212ENST00000583320 KRTAP20-2Q3LI61 65 aa6□□□□□ -1.45
SNX11-212ENST00000583320 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
SNX11-212ENST00000583320 AHNAKQ09666 5890 aaKnown RBP5.79□□□□□ -1.48
SNX11-212ENST00000583320 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
SNX11-212ENST00000583320 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
SNX11-212ENST00000583320 LUZP6Q538Z0 58 aa5.72□□□□□ -1.49
SNX11-212ENST00000583320 SYNE1Q8NF91 8797 aaKnown RBP5.71□□□□□ -1.5
SNX11-212ENST00000583320 MUC5ACP98088 5654 aa5.69□□□□□ -1.5
SNX11-212ENST00000583320 KRTAP12-4P60329 112 aa5.68□□□□□ -1.5
SNX11-212ENST00000583320 MUC5BQ9HC84 5762 aaPredicted RBP5.67□□□□□ -1.5
SNX11-212ENST00000583320 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
SNX11-212ENST00000583320 KRTAP4-11Q9BYQ6 195 aa5.62□□□□□ -1.51
SNX11-212ENST00000583320 KRTAP5-8O75690 187 aa5.5□□□□□ -1.53
SNX11-212ENST00000583320 NDUFAF8A1L188 74 aa5.47□□□□□ -1.53
SNX11-212ENST00000583320 KRTAP5-2Q701N4 177 aa5.41□□□□□ -1.54
SNX11-212ENST00000583320 MT1AP04731 61 aa5.38□□□□□ -1.55
SNX11-212ENST00000583320 OBSCNQ5VST9 7968 aa5.29□□□□□ -1.56
SNX11-212ENST00000583320 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
SNX11-212ENST00000583320 KRTAP9-9Q9BYP9 154 aa5.24□□□□□ -1.57
SNX11-212ENST00000583320 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
SNX11-212ENST00000583320 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
SNX11-212ENST00000583320 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
SNX11-212ENST00000583320 H3BS24 57 aa4.98□□□□□ -1.61
SNX11-212ENST00000583320 A0A0A0MQY5 61 aa4.96□□□□□ -1.62
SNX11-212ENST00000583320 MT3P25713 68 aa4.88□□□□□ -1.63
SNX11-212ENST00000583320 INE1O15225 51 aa4.63□□□□□ -1.67
SNX11-212ENST00000583320 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
SNX11-212ENST00000583320 LCE3EQ5T5B0 92 aa4.45□□□□□ -1.7
SNX11-212ENST00000583320 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
SNX11-212ENST00000583320 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
SNX11-212ENST00000583320 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
SNX11-212ENST00000583320 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
SNX11-212ENST00000583320 LCE1CQ5T751 118 aa4.15□□□□□ -1.75
SNX11-212ENST00000583320 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
SNX11-212ENST00000583320 PHGR1C9JFL3 82 aa3.86□□□□□ -1.79
SNX11-212ENST00000583320 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
SNX11-212ENST00000583320 PRM1P04553 51 aa3.77□□□□□ -1.81
SNX11-212ENST00000583320 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
SNX11-212ENST00000583320 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
SNX11-212ENST00000583320 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
SNX11-212ENST00000583320 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
SNX11-212ENST00000583320 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
SNX11-212ENST00000583320 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 129.1 ms