RNA–Protein interactions for RNA: ENST00000583117.1

LINC00200-202, long intergenic non-protein coding RNA 200, humanhuman

TSL 3

Gene LINC00200, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00200-202ENST00000583117 KRTAP2-1Q9BYU5 128 aa6.59□□□□□ -1.35
LINC00200-202ENST00000583117 LCE5AQ5TCM9 118 aa6.57□□□□□ -1.36
LINC00200-202ENST00000583117 LCE3BQ5TA77 95 aa6.52□□□□□ -1.37
LINC00200-202ENST00000583117 MT1GP13640 62 aa6.49□□□□□ -1.37
LINC00200-202ENST00000583117 CDC42SE1Q9NRR8 79 aa6.48□□□□□ -1.37
LINC00200-202ENST00000583117 PP632Q6XCG6 107 aa6.46□□□□□ -1.38
LINC00200-202ENST00000583117 MT1LQ93083 61 aa6.44□□□□□ -1.38
LINC00200-202ENST00000583117 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
LINC00200-202ENST00000583117 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
LINC00200-202ENST00000583117 MT1MQ8N339 61 aa6.35□□□□□ -1.39
LINC00200-202ENST00000583117 ROMO1P60602 79 aa6.34□□□□□ -1.39
LINC00200-202ENST00000583117 DSTQ03001 7570 aaKnown RBP6.23□□□□□ -1.41
LINC00200-202ENST00000583117 GPR98Q8WXG9 6306 aa6.2□□□□□ -1.42
LINC00200-202ENST00000583117 KRTAP19-4Q3LI73 84 aa6.17□□□□□ -1.42
LINC00200-202ENST00000583117 KRTAP4-3Q9BYR4 195 aa6.14□□□□□ -1.43
LINC00200-202ENST00000583117 KRTAP15-1Q3LI76 137 aa6.09□□□□□ -1.43
LINC00200-202ENST00000583117 KRTAP4-7Q9BYR0 210 aa6.09□□□□□ -1.43
LINC00200-202ENST00000583117 BRK1Q8WUW1 75 aa6.06□□□□□ -1.44
LINC00200-202ENST00000583117 LCE4AQ5TA78 99 aa5.99□□□□□ -1.45
LINC00200-202ENST00000583117 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
LINC00200-202ENST00000583117 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
LINC00200-202ENST00000583117 KRTAP5-4Q6L8H1 288 aa5.91□□□□□ -1.46
LINC00200-202ENST00000583117 LCE1DQ5T752 114 aa5.87□□□□□ -1.47
LINC00200-202ENST00000583117 MT4P47944 62 aa5.84□□□□□ -1.47
LINC00200-202ENST00000583117 KRTAP5-5Q701N2 237 aaPredicted RBP5.79□□□□□ -1.48
LINC00200-202ENST00000583117 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
LINC00200-202ENST00000583117 PMAIP1Q13794 54 aa5.72□□□□□ -1.49
LINC00200-202ENST00000583117 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
LINC00200-202ENST00000583117 HMCN1Q96RW7 5635 aa5.67□□□□□ -1.5
LINC00200-202ENST00000583117 KRTAP5-10Q6L8G5 202 aa5.66□□□□□ -1.5
LINC00200-202ENST00000583117 SVIPQ8NHG7 77 aa5.66□□□□□ -1.5
LINC00200-202ENST00000583117 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
LINC00200-202ENST00000583117 AHNAK2Q8IVF2 5795 aa5.61□□□□□ -1.51
LINC00200-202ENST00000583117 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
LINC00200-202ENST00000583117 KRTAP20-2Q3LI61 65 aa5.55□□□□□ -1.52
LINC00200-202ENST00000583117 KRTAP9-6A8MVA2 160 aa5.54□□□□□ -1.52
LINC00200-202ENST00000583117 KRTAP5-7Q6L8G8 165 aa5.53□□□□□ -1.52
LINC00200-202ENST00000583117 PRO0628Q9UI54 55 aa5.52□□□□□ -1.53
LINC00200-202ENST00000583117 MT1AP04731 61 aa5.5□□□□□ -1.53
LINC00200-202ENST00000583117 KRTAP6-1Q3LI64 71 aa5.42□□□□□ -1.54
LINC00200-202ENST00000583117 SYNE1Q8NF91 8797 aaKnown RBP5.41□□□□□ -1.54
LINC00200-202ENST00000583117 PRAC1Q96KF2 57 aa5.39□□□□□ -1.55
LINC00200-202ENST00000583117 KRTAP5-3Q6L8H2 238 aa5.37□□□□□ -1.55
LINC00200-202ENST00000583117 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
LINC00200-202ENST00000583117 KRTAP5-2Q701N4 177 aa5.22□□□□□ -1.57
LINC00200-202ENST00000583117 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
LINC00200-202ENST00000583117 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
LINC00200-202ENST00000583117 MT3P25713 68 aa5.04□□□□□ -1.6
LINC00200-202ENST00000583117 KRTAP4-11Q9BYQ6 195 aa5.01□□□□□ -1.61
LINC00200-202ENST00000583117 H3BS24 57 aa5□□□□□ -1.61
LINC00200-202ENST00000583117 KRTAP5-8O75690 187 aa4.82□□□□□ -1.64
LINC00200-202ENST00000583117 AHNAKQ09666 5890 aaKnown RBP4.78□□□□□ -1.64
LINC00200-202ENST00000583117 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
LINC00200-202ENST00000583117 MUC5BQ9HC84 5762 aaPredicted RBP4.73□□□□□ -1.65
LINC00200-202ENST00000583117 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
LINC00200-202ENST00000583117 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
LINC00200-202ENST00000583117 KRTAP5-1Q6L8H4 278 aa4.62□□□□□ -1.67
LINC00200-202ENST00000583117 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
LINC00200-202ENST00000583117 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
LINC00200-202ENST00000583117 KRTAP4-12Q9BQ66 201 aa4.37□□□□□ -1.71
LINC00200-202ENST00000583117 LCE3DQ9BYE3 92 aa4.35□□□□□ -1.71
LINC00200-202ENST00000583117 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
LINC00200-202ENST00000583117 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
LINC00200-202ENST00000583117 LCE1CQ5T751 118 aa4.23□□□□□ -1.73
LINC00200-202ENST00000583117 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
LINC00200-202ENST00000583117 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
LINC00200-202ENST00000583117 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
LINC00200-202ENST00000583117 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
LINC00200-202ENST00000583117 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
LINC00200-202ENST00000583117 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
LINC00200-202ENST00000583117 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
LINC00200-202ENST00000583117 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
LINC00200-202ENST00000583117 PRM1P04553 51 aa3.23□□□□□ -1.89
LINC00200-202ENST00000583117 INE1O15225 51 aa3.22□□□□□ -1.89
LINC00200-202ENST00000583117 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
LINC00200-202ENST00000583117 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
LINC00200-202ENST00000583117 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
LINC00200-202ENST00000583117 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 52.3 ms