RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 HMCN1Q96RW7 5635 aa5.97□□□□□ -1.45
SREBF1-221ENST00000583080 MT4P47944 62 aa5.96□□□□□ -1.46
SREBF1-221ENST00000583080 AHNAK2Q8IVF2 5795 aa5.92□□□□□ -1.46
SREBF1-221ENST00000583080 A8MU10 97 aa5.92□□□□□ -1.46
SREBF1-221ENST00000583080 KRTAP13-4Q3LI77 160 aa5.9□□□□□ -1.46
SREBF1-221ENST00000583080 LCE4AQ5TA78 99 aa5.9□□□□□ -1.46
SREBF1-221ENST00000583080 CAMK2N1Q7Z7J9 78 aa5.9□□□□□ -1.46
SREBF1-221ENST00000583080 MT1GP13640 62 aa5.85□□□□□ -1.47
SREBF1-221ENST00000583080 KRTAP5-10Q6L8G5 202 aa5.85□□□□□ -1.47
SREBF1-221ENST00000583080 KRTAP19-5Q3LI72 72 aa5.83□□□□□ -1.48
SREBF1-221ENST00000583080 K7ERS5 55 aa5.8□□□□□ -1.48
SREBF1-221ENST00000583080 MT1MQ8N339 61 aa5.8□□□□□ -1.48
SREBF1-221ENST00000583080 PP632Q6XCG6 107 aa5.78□□□□□ -1.48
SREBF1-221ENST00000583080 A0A0D9SG42 100 aa5.77□□□□□ -1.49
SREBF1-221ENST00000583080 A0A1B0GU33 70 aa5.77□□□□□ -1.49
SREBF1-221ENST00000583080 KRTAP5-4Q6L8H1 288 aa5.76□□□□□ -1.49
SREBF1-221ENST00000583080 KRTAP4-6Q9BYQ5 205 aa5.75□□□□□ -1.49
SREBF1-221ENST00000583080 MT1LQ93083 61 aa5.72□□□□□ -1.49
SREBF1-221ENST00000583080 KRTAP4-3Q9BYR4 195 aa5.72□□□□□ -1.49
SREBF1-221ENST00000583080 KRTAP5-7Q6L8G8 165 aa5.66□□□□□ -1.5
SREBF1-221ENST00000583080 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
SREBF1-221ENST00000583080 KRTAP25-1Q3LHN0 102 aa5.56□□□□□ -1.52
SREBF1-221ENST00000583080 SPINT4Q6UDR6 99 aa5.56□□□□□ -1.52
SREBF1-221ENST00000583080 PRAC1Q96KF2 57 aa5.55□□□□□ -1.52
SREBF1-221ENST00000583080 C10orf95Q9H7T3 257 aa5.52□□□□□ -1.53
SREBF1-221ENST00000583080 ROMO1P60602 79 aa5.51□□□□□ -1.53
SREBF1-221ENST00000583080 KRTAP12-1P59990 96 aa5.5□□□□□ -1.53
SREBF1-221ENST00000583080 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
SREBF1-221ENST00000583080 KRTAP20-2Q3LI61 65 aa5.47□□□□□ -1.53
SREBF1-221ENST00000583080 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
SREBF1-221ENST00000583080 SPRR5A0A1B0GTR4 108 aa5.41□□□□□ -1.54
SREBF1-221ENST00000583080 KRTAP5-5Q701N2 237 aaPredicted RBP5.36□□□□□ -1.55
SREBF1-221ENST00000583080 TNP1P09430 55 aa5.31□□□□□ -1.56
SREBF1-221ENST00000583080 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
SREBF1-221ENST00000583080 KRTAP12-3P60328 96 aa5.25□□□□□ -1.57
SREBF1-221ENST00000583080 SYNE1Q8NF91 8797 aaKnown RBP5.24□□□□□ -1.57
SREBF1-221ENST00000583080 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
SREBF1-221ENST00000583080 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
SREBF1-221ENST00000583080 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
SREBF1-221ENST00000583080 H3BS24 57 aa5.04□□□□□ -1.6
SREBF1-221ENST00000583080 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
SREBF1-221ENST00000583080 KRTAP5-2Q701N4 177 aa4.98□□□□□ -1.61
SREBF1-221ENST00000583080 AHNAKQ09666 5890 aaKnown RBP4.97□□□□□ -1.61
SREBF1-221ENST00000583080 MUC5ACP98088 5654 aa4.95□□□□□ -1.62
SREBF1-221ENST00000583080 KRTAP5-8O75690 187 aa4.94□□□□□ -1.62
SREBF1-221ENST00000583080 MUC5BQ9HC84 5762 aaPredicted RBP4.91□□□□□ -1.62
SREBF1-221ENST00000583080 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
SREBF1-221ENST00000583080 MT1AP04731 61 aa4.85□□□□□ -1.63
SREBF1-221ENST00000583080 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
SREBF1-221ENST00000583080 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
SREBF1-221ENST00000583080 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
SREBF1-221ENST00000583080 LUZP6Q538Z0 58 aa4.77□□□□□ -1.65
SREBF1-221ENST00000583080 KRTAP6-2Q3LI66 62 aa4.73□□□□□ -1.65
SREBF1-221ENST00000583080 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
SREBF1-221ENST00000583080 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
SREBF1-221ENST00000583080 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
SREBF1-221ENST00000583080 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
SREBF1-221ENST00000583080 A0A0A0MQY5 61 aa4.58□□□□□ -1.68
SREBF1-221ENST00000583080 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
SREBF1-221ENST00000583080 MT3P25713 68 aa4.42□□□□□ -1.7
SREBF1-221ENST00000583080 INE1O15225 51 aa4.27□□□□□ -1.73
SREBF1-221ENST00000583080 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
SREBF1-221ENST00000583080 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
SREBF1-221ENST00000583080 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
SREBF1-221ENST00000583080 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
SREBF1-221ENST00000583080 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
SREBF1-221ENST00000583080 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
SREBF1-221ENST00000583080 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
SREBF1-221ENST00000583080 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
SREBF1-221ENST00000583080 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
SREBF1-221ENST00000583080 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
SREBF1-221ENST00000583080 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
SREBF1-221ENST00000583080 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
SREBF1-221ENST00000583080 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
SREBF1-221ENST00000583080 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
SREBF1-221ENST00000583080 PRM1P04553 51 aa2.79□□□□□ -1.96
SREBF1-221ENST00000583080 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
SREBF1-221ENST00000583080 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 112.1 ms