RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 KRTAP5-9P26371 169 aa4.75□□□□□ -1.65
SNRPD1-204ENST00000582475 KRTAP8-1Q8IUC2 63 aa4.75□□□□□ -1.65
SNRPD1-204ENST00000582475 SPRR2FQ96RM1 72 aa4.68□□□□□ -1.66
SNRPD1-204ENST00000582475 A6NED7 52 aa4.67□□□□□ -1.66
SNRPD1-204ENST00000582475 C10orf95Q9H7T3 257 aa4.66□□□□□ -1.66
SNRPD1-204ENST00000582475 K7ERS5 55 aa4.64□□□□□ -1.67
SNRPD1-204ENST00000582475 MDN1Q9NU22 5596 aa4.62□□□□□ -1.67
SNRPD1-204ENST00000582475 TNP1P09430 55 aa4.6□□□□□ -1.67
SNRPD1-204ENST00000582475 NEBP20929 6669 aa4.6□□□□□ -1.67
SNRPD1-204ENST00000582475 SPRR2EP22531 72 aa4.55□□□□□ -1.68
SNRPD1-204ENST00000582475 SPRR2BP35325 72 aa4.55□□□□□ -1.68
SNRPD1-204ENST00000582475 SPRR2AP35326 72 aa4.55□□□□□ -1.68
SNRPD1-204ENST00000582475 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
SNRPD1-204ENST00000582475 CDC42SE1Q9NRR8 79 aa4.5□□□□□ -1.69
SNRPD1-204ENST00000582475 LCE3AQ5TA76 89 aa4.48□□□□□ -1.69
SNRPD1-204ENST00000582475 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
SNRPD1-204ENST00000582475 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
SNRPD1-204ENST00000582475 MT1EP04732 61 aa4.45□□□□□ -1.7
SNRPD1-204ENST00000582475 KRTAP25-1Q3LHN0 102 aa4.45□□□□□ -1.7
SNRPD1-204ENST00000582475 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
SNRPD1-204ENST00000582475 SPRR2DP22532 72 aa4.4□□□□□ -1.71
SNRPD1-204ENST00000582475 KRTAP2-3P0C7H8 128 aa4.38□□□□□ -1.71
SNRPD1-204ENST00000582475 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
SNRPD1-204ENST00000582475 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
SNRPD1-204ENST00000582475 ROMO1P60602 79 aa4.37□□□□□ -1.71
SNRPD1-204ENST00000582475 LCE1FQ5T754 118 aa4.37□□□□□ -1.71
SNRPD1-204ENST00000582475 KRTAP19-3Q7Z4W3 81 aa4.37□□□□□ -1.71
SNRPD1-204ENST00000582475 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
SNRPD1-204ENST00000582475 KRTAP12-3P60328 96 aa4.31□□□□□ -1.72
SNRPD1-204ENST00000582475 BRK1Q8WUW1 75 aa4.31□□□□□ -1.72
SNRPD1-204ENST00000582475 MT1GP13640 62 aa4.3□□□□□ -1.72
SNRPD1-204ENST00000582475 MT1LQ93083 61 aa4.29□□□□□ -1.72
SNRPD1-204ENST00000582475 KRTAP2-1Q9BYU5 128 aa4.26□□□□□ -1.73
SNRPD1-204ENST00000582475 PP632Q6XCG6 107 aa4.25□□□□□ -1.73
SNRPD1-204ENST00000582475 MT1MQ8N339 61 aa4.22□□□□□ -1.73
SNRPD1-204ENST00000582475 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
SNRPD1-204ENST00000582475 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
SNRPD1-204ENST00000582475 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
SNRPD1-204ENST00000582475 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
SNRPD1-204ENST00000582475 DSTQ03001 7570 aaKnown RBP4.13□□□□□ -1.75
SNRPD1-204ENST00000582475 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
SNRPD1-204ENST00000582475 PMAIP1Q13794 54 aa4.08□□□□□ -1.76
SNRPD1-204ENST00000582475 KTN1-AS1Q86SY8 53 aa3.88□□□□□ -1.79
SNRPD1-204ENST00000582475 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
SNRPD1-204ENST00000582475 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
SNRPD1-204ENST00000582475 MT4P47944 62 aa3.83□□□□□ -1.8
SNRPD1-204ENST00000582475 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
SNRPD1-204ENST00000582475 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
SNRPD1-204ENST00000582475 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
SNRPD1-204ENST00000582475 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
SNRPD1-204ENST00000582475 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
SNRPD1-204ENST00000582475 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
SNRPD1-204ENST00000582475 MT1AP04731 61 aa3.66□□□□□ -1.82
SNRPD1-204ENST00000582475 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
SNRPD1-204ENST00000582475 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
SNRPD1-204ENST00000582475 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
SNRPD1-204ENST00000582475 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
SNRPD1-204ENST00000582475 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
SNRPD1-204ENST00000582475 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
SNRPD1-204ENST00000582475 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
SNRPD1-204ENST00000582475 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
SNRPD1-204ENST00000582475 KRTAP5-7Q6L8G8 165 aa3.26□□□□□ -1.89
SNRPD1-204ENST00000582475 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
SNRPD1-204ENST00000582475 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
SNRPD1-204ENST00000582475 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
SNRPD1-204ENST00000582475 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
SNRPD1-204ENST00000582475 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
SNRPD1-204ENST00000582475 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
SNRPD1-204ENST00000582475 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
SNRPD1-204ENST00000582475 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
SNRPD1-204ENST00000582475 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
SNRPD1-204ENST00000582475 INE1O15225 51 aa2.45□□□□□ -2.02
SNRPD1-204ENST00000582475 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
SNRPD1-204ENST00000582475 PRM1P04553 51 aa2.24□□□□□ -2.05
SNRPD1-204ENST00000582475 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
SNRPD1-204ENST00000582475 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
SNRPD1-204ENST00000582475 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 8.4 ms