RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 KRTAP23-1A1A580 65 aa7.28□□□□□ -1.24
TOP3A-213ENST00000582230 KRTAP19-3Q7Z4W3 81 aa7.27□□□□□ -1.25
TOP3A-213ENST00000582230 BRK1Q8WUW1 75 aa7.27□□□□□ -1.25
TOP3A-213ENST00000582230 LCE5AQ5TCM9 118 aa7.23□□□□□ -1.25
TOP3A-213ENST00000582230 KRTAP12-3P60328 96 aa7.22□□□□□ -1.25
TOP3A-213ENST00000582230 KRTAP2-2Q9BYT5 123 aa7.2□□□□□ -1.26
TOP3A-213ENST00000582230 KRTAP2-1Q9BYU5 128 aa7.2□□□□□ -1.26
TOP3A-213ENST00000582230 MT1GP13640 62 aa7.17□□□□□ -1.26
TOP3A-213ENST00000582230 MT1LQ93083 61 aa7.17□□□□□ -1.26
TOP3A-213ENST00000582230 GPR98Q8WXG9 6306 aa7.12□□□□□ -1.27
TOP3A-213ENST00000582230 PP632Q6XCG6 107 aa7.12□□□□□ -1.27
TOP3A-213ENST00000582230 LCE3BQ5TA77 95 aa7.05□□□□□ -1.28
TOP3A-213ENST00000582230 MT1MQ8N339 61 aa7.02□□□□□ -1.29
TOP3A-213ENST00000582230 KRTAP19-4Q3LI73 84 aa6.92□□□□□ -1.3
TOP3A-213ENST00000582230 KRTAP15-1Q3LI76 137 aa6.91□□□□□ -1.3
TOP3A-213ENST00000582230 PMAIP1Q13794 54 aa6.89□□□□□ -1.31
TOP3A-213ENST00000582230 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
TOP3A-213ENST00000582230 KRTAP4-7Q9BYR0 210 aa6.8□□□□□ -1.32
TOP3A-213ENST00000582230 PRO0628Q9UI54 55 aa6.76□□□□□ -1.33
TOP3A-213ENST00000582230 DSTQ03001 7570 aaKnown RBP6.74□□□□□ -1.33
TOP3A-213ENST00000582230 LCE3CQ5T5A8 94 aa6.7□□□□□ -1.34
TOP3A-213ENST00000582230 LOC100996750A0A140TA64 210 aa6.57□□□□□ -1.36
TOP3A-213ENST00000582230 KRTAP4-6Q9BYQ5 205 aa6.57□□□□□ -1.36
TOP3A-213ENST00000582230 KRTAP4-9Q9BYQ8 210 aa6.57□□□□□ -1.36
TOP3A-213ENST00000582230 LCE4AQ5TA78 99 aa6.5□□□□□ -1.37
TOP3A-213ENST00000582230 PRAC1Q96KF2 57 aa6.46□□□□□ -1.38
TOP3A-213ENST00000582230 KRTAP5-4Q6L8H1 288 aa6.44□□□□□ -1.38
TOP3A-213ENST00000582230 KRTAP5-5Q701N2 237 aaPredicted RBP6.4□□□□□ -1.38
TOP3A-213ENST00000582230 KTN1-AS1Q86SY8 53 aa6.36□□□□□ -1.39
TOP3A-213ENST00000582230 LCE1DQ5T752 114 aa6.34□□□□□ -1.39
TOP3A-213ENST00000582230 MT4P47944 62 aa6.32□□□□□ -1.4
TOP3A-213ENST00000582230 HMCN1Q96RW7 5635 aa6.29□□□□□ -1.4
TOP3A-213ENST00000582230 KRTAP9-6A8MVA2 160 aa6.27□□□□□ -1.41
TOP3A-213ENST00000582230 AHNAK2Q8IVF2 5795 aa6.27□□□□□ -1.41
TOP3A-213ENST00000582230 KRTAP5-10Q6L8G5 202 aa6.26□□□□□ -1.41
TOP3A-213ENST00000582230 H3BS24 57 aa6.22□□□□□ -1.41
TOP3A-213ENST00000582230 KRTAP12-4P60329 112 aa6.16□□□□□ -1.42
TOP3A-213ENST00000582230 MT1AP04731 61 aa6.11□□□□□ -1.43
TOP3A-213ENST00000582230 KRTAP5-7Q6L8G8 165 aa6.11□□□□□ -1.43
TOP3A-213ENST00000582230 SPRR5A0A1B0GTR4 108 aa6.09□□□□□ -1.43
TOP3A-213ENST00000582230 KRTAP20-2Q3LI61 65 aa6.04□□□□□ -1.44
TOP3A-213ENST00000582230 KRTAP6-1Q3LI64 71 aa6.02□□□□□ -1.45
TOP3A-213ENST00000582230 SVIPQ8NHG7 77 aa6.02□□□□□ -1.45
TOP3A-213ENST00000582230 KRTAP4-12Q9BQ66 201 aa5.98□□□□□ -1.45
TOP3A-213ENST00000582230 SYNE1Q8NF91 8797 aaKnown RBP5.95□□□□□ -1.46
TOP3A-213ENST00000582230 KRTAP5-3Q6L8H2 238 aa5.91□□□□□ -1.46
TOP3A-213ENST00000582230 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
TOP3A-213ENST00000582230 KRTAP5-2Q701N4 177 aa5.73□□□□□ -1.49
TOP3A-213ENST00000582230 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
TOP3A-213ENST00000582230 KRTAP6-2Q3LI66 62 aa5.68□□□□□ -1.5
TOP3A-213ENST00000582230 MT3P25713 68 aa5.59□□□□□ -1.51
TOP3A-213ENST00000582230 LUZP6Q538Z0 58 aa5.47□□□□□ -1.53
TOP3A-213ENST00000582230 AHNAKQ09666 5890 aaKnown RBP5.43□□□□□ -1.54
TOP3A-213ENST00000582230 KRTAP4-11Q9BYQ6 195 aa5.42□□□□□ -1.54
TOP3A-213ENST00000582230 MUC5ACP98088 5654 aa5.36□□□□□ -1.55
TOP3A-213ENST00000582230 MUC5BQ9HC84 5762 aaPredicted RBP5.29□□□□□ -1.56
TOP3A-213ENST00000582230 KRTAP5-8O75690 187 aa5.21□□□□□ -1.58
TOP3A-213ENST00000582230 KRTAP4-2Q9BYR5 136 aa5.12□□□□□ -1.59
TOP3A-213ENST00000582230 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
TOP3A-213ENST00000582230 LCE1EQ5T753 118 aa5.04□□□□□ -1.6
TOP3A-213ENST00000582230 KRTAP5-1Q6L8H4 278 aa5.04□□□□□ -1.6
TOP3A-213ENST00000582230 LCE3DQ9BYE3 92 aa4.93□□□□□ -1.62
TOP3A-213ENST00000582230 NDUFAF8A1L188 74 aa4.78□□□□□ -1.64
TOP3A-213ENST00000582230 LCE3EQ5T5B0 92 aa4.71□□□□□ -1.66
TOP3A-213ENST00000582230 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
TOP3A-213ENST00000582230 LCE1BQ5T7P3 118 aa4.67□□□□□ -1.66
TOP3A-213ENST00000582230 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.3□□□□□ -1.72
TOP3A-213ENST00000582230 KRTAP5-11Q6L8G4 156 aa4.17□□□□□ -1.74
TOP3A-213ENST00000582230 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
TOP3A-213ENST00000582230 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
TOP3A-213ENST00000582230 INE1O15225 51 aa3.97□□□□□ -1.77
TOP3A-213ENST00000582230 KRTAP21-2Q3LI59 83 aa3.97□□□□□ -1.77
TOP3A-213ENST00000582230 PRM1P04553 51 aa3.77□□□□□ -1.81
TOP3A-213ENST00000582230 PHGR1C9JFL3 82 aa3.68□□□□□ -1.82
TOP3A-213ENST00000582230 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
TOP3A-213ENST00000582230 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
TOP3A-213ENST00000582230 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
TOP3A-213ENST00000582230 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 134.8 ms