RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
TOP3A-212ENST00000582122 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
TOP3A-212ENST00000582122 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
TOP3A-212ENST00000582122 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
TOP3A-212ENST00000582122 LCE5AQ5TCM9 118 aa3.8□□□□□ -1.8
TOP3A-212ENST00000582122 CDC42SE1Q9NRR8 79 aa3.8□□□□□ -1.8
TOP3A-212ENST00000582122 PP632Q6XCG6 107 aa3.79□□□□□ -1.8
TOP3A-212ENST00000582122 KRTAP23-1A1A580 65 aa3.78□□□□□ -1.8
TOP3A-212ENST00000582122 MT1GP13640 62 aa3.78□□□□□ -1.8
TOP3A-212ENST00000582122 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
TOP3A-212ENST00000582122 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
TOP3A-212ENST00000582122 ROMO1P60602 79 aa3.72□□□□□ -1.81
TOP3A-212ENST00000582122 MT1LQ93083 61 aa3.72□□□□□ -1.81
TOP3A-212ENST00000582122 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
TOP3A-212ENST00000582122 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
TOP3A-212ENST00000582122 AHNAK2Q8IVF2 5795 aa3.66□□□□□ -1.82
TOP3A-212ENST00000582122 MT1MQ8N339 61 aa3.65□□□□□ -1.83
TOP3A-212ENST00000582122 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
TOP3A-212ENST00000582122 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
TOP3A-212ENST00000582122 KRTAP15-1Q3LI76 137 aa3.56□□□□□ -1.84
TOP3A-212ENST00000582122 BRK1Q8WUW1 75 aa3.56□□□□□ -1.84
TOP3A-212ENST00000582122 MT4P47944 62 aa3.55□□□□□ -1.84
TOP3A-212ENST00000582122 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
TOP3A-212ENST00000582122 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
TOP3A-212ENST00000582122 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
TOP3A-212ENST00000582122 KRTAP4-7Q9BYR0 210 aa3.46□□□□□ -1.86
TOP3A-212ENST00000582122 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
TOP3A-212ENST00000582122 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
TOP3A-212ENST00000582122 KRTAP5-3Q6L8H2 238 aa3.39□□□□□ -1.87
TOP3A-212ENST00000582122 KRTAP4-6Q9BYQ5 205 aa3.39□□□□□ -1.87
TOP3A-212ENST00000582122 PMAIP1Q13794 54 aa3.38□□□□□ -1.87
TOP3A-212ENST00000582122 SPRR5A0A1B0GTR4 108 aa3.33□□□□□ -1.88
TOP3A-212ENST00000582122 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
TOP3A-212ENST00000582122 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
TOP3A-212ENST00000582122 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
TOP3A-212ENST00000582122 PRO0628Q9UI54 55 aa3.27□□□□□ -1.89
TOP3A-212ENST00000582122 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
TOP3A-212ENST00000582122 MT1AP04731 61 aa3.19□□□□□ -1.9
TOP3A-212ENST00000582122 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
TOP3A-212ENST00000582122 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
TOP3A-212ENST00000582122 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
TOP3A-212ENST00000582122 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
TOP3A-212ENST00000582122 KTN1-AS1Q86SY8 53 aa3.09□□□□□ -1.91
TOP3A-212ENST00000582122 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
TOP3A-212ENST00000582122 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
TOP3A-212ENST00000582122 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
TOP3A-212ENST00000582122 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
TOP3A-212ENST00000582122 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
TOP3A-212ENST00000582122 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
TOP3A-212ENST00000582122 SVIPQ8NHG7 77 aa2.99□□□□□ -1.93
TOP3A-212ENST00000582122 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
TOP3A-212ENST00000582122 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
TOP3A-212ENST00000582122 MT3P25713 68 aa2.94□□□□□ -1.94
TOP3A-212ENST00000582122 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
TOP3A-212ENST00000582122 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
TOP3A-212ENST00000582122 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
TOP3A-212ENST00000582122 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
TOP3A-212ENST00000582122 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
TOP3A-212ENST00000582122 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
TOP3A-212ENST00000582122 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
TOP3A-212ENST00000582122 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
TOP3A-212ENST00000582122 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
TOP3A-212ENST00000582122 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
TOP3A-212ENST00000582122 NDUFAF8A1L188 74 aa2.28□□□□□ -2.04
TOP3A-212ENST00000582122 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
TOP3A-212ENST00000582122 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
TOP3A-212ENST00000582122 KRTAP4-12Q9BQ66 201 aa2.22□□□□□ -2.05
TOP3A-212ENST00000582122 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
TOP3A-212ENST00000582122 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
TOP3A-212ENST00000582122 H3BS24 57 aa2.08□□□□□ -2.08
TOP3A-212ENST00000582122 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
TOP3A-212ENST00000582122 A0A0A0MQY5 61 aa2.02□□□□□ -2.09
TOP3A-212ENST00000582122 INE1O15225 51 aa1.96□□□□□ -2.1
TOP3A-212ENST00000582122 PRM1P04553 51 aa1.87□□□□□ -2.11
TOP3A-212ENST00000582122 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
TOP3A-212ENST00000582122 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
TOP3A-212ENST00000582122 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
TOP3A-212ENST00000582122 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 107.6 ms