RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
SRSF1-204ENST00000581979 KRTAP10-7P60409 375 aaPredicted RBP4.98□□□□□ -1.61
SRSF1-204ENST00000581979 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
SRSF1-204ENST00000581979 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.62
SRSF1-204ENST00000581979 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
SRSF1-204ENST00000581979 KRTAP10-12P60413 245 aa4.93□□□□□ -1.62
SRSF1-204ENST00000581979 KRTAP8-1Q8IUC2 63 aa4.92□□□□□ -1.62
SRSF1-204ENST00000581979 KRTAP2-3P0C7H8 128 aa4.92□□□□□ -1.62
SRSF1-204ENST00000581979 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
SRSF1-204ENST00000581979 KRTAP2-4Q9BYR9 128 aa4.92□□□□□ -1.62
SRSF1-204ENST00000581979 LCE4AQ5TA78 99 aa4.91□□□□□ -1.62
SRSF1-204ENST00000581979 SPRR2EP22531 72 aa4.9□□□□□ -1.62
SRSF1-204ENST00000581979 SPRR2BP35325 72 aa4.9□□□□□ -1.62
SRSF1-204ENST00000581979 SPRR2AP35326 72 aa4.9□□□□□ -1.62
SRSF1-204ENST00000581979 LCE3AQ5TA76 89 aa4.9□□□□□ -1.62
SRSF1-204ENST00000581979 LCE1AQ5T7P2 110 aa4.86□□□□□ -1.63
SRSF1-204ENST00000581979 KRTAP4-2Q9BYR5 136 aa4.77□□□□□ -1.65
SRSF1-204ENST00000581979 KRTAP4-11Q9BYQ6 195 aa4.75□□□□□ -1.65
SRSF1-204ENST00000581979 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
SRSF1-204ENST00000581979 KRTAP2-1Q9BYU5 128 aa4.75□□□□□ -1.65
SRSF1-204ENST00000581979 SPRR2DP22532 72 aa4.75□□□□□ -1.65
SRSF1-204ENST00000581979 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
SRSF1-204ENST00000581979 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
SRSF1-204ENST00000581979 KRTAP19-5Q3LI72 72 aa4.69□□□□□ -1.66
SRSF1-204ENST00000581979 KRTAP19-7Q3SYF9 63 aa4.62□□□□□ -1.67
SRSF1-204ENST00000581979 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
SRSF1-204ENST00000581979 MT1EP04732 61 aa4.55□□□□□ -1.68
SRSF1-204ENST00000581979 KRTAP19-3Q7Z4W3 81 aa4.46□□□□□ -1.69
SRSF1-204ENST00000581979 MT1LQ93083 61 aa4.45□□□□□ -1.7
SRSF1-204ENST00000581979 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
SRSF1-204ENST00000581979 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
SRSF1-204ENST00000581979 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
SRSF1-204ENST00000581979 MT1GP13640 62 aa4.35□□□□□ -1.71
SRSF1-204ENST00000581979 MT1MQ8N339 61 aa4.29□□□□□ -1.72
SRSF1-204ENST00000581979 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
SRSF1-204ENST00000581979 GPR98Q8WXG9 6306 aa4.21□□□□□ -1.74
SRSF1-204ENST00000581979 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
SRSF1-204ENST00000581979 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
SRSF1-204ENST00000581979 MT4P47944 62 aa4.15□□□□□ -1.75
SRSF1-204ENST00000581979 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
SRSF1-204ENST00000581979 KRTAP9-6A8MVA2 160 aa4.13□□□□□ -1.75
SRSF1-204ENST00000581979 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
SRSF1-204ENST00000581979 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
SRSF1-204ENST00000581979 KRTAP5-10Q6L8G5 202 aa3.97□□□□□ -1.77
SRSF1-204ENST00000581979 AHNAK2Q8IVF2 5795 aa3.96□□□□□ -1.78
SRSF1-204ENST00000581979 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
SRSF1-204ENST00000581979 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
SRSF1-204ENST00000581979 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
SRSF1-204ENST00000581979 KRTAP12-4P60329 112 aa3.84□□□□□ -1.8
SRSF1-204ENST00000581979 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
SRSF1-204ENST00000581979 MT1AP04731 61 aa3.78□□□□□ -1.8
SRSF1-204ENST00000581979 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
SRSF1-204ENST00000581979 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
SRSF1-204ENST00000581979 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
SRSF1-204ENST00000581979 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
SRSF1-204ENST00000581979 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
SRSF1-204ENST00000581979 MT3P25713 68 aa3.44□□□□□ -1.86
SRSF1-204ENST00000581979 INE1O15225 51 aa3.39□□□□□ -1.87
SRSF1-204ENST00000581979 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.88
SRSF1-204ENST00000581979 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
SRSF1-204ENST00000581979 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
SRSF1-204ENST00000581979 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
SRSF1-204ENST00000581979 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
SRSF1-204ENST00000581979 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
SRSF1-204ENST00000581979 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
SRSF1-204ENST00000581979 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
SRSF1-204ENST00000581979 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
SRSF1-204ENST00000581979 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
SRSF1-204ENST00000581979 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
SRSF1-204ENST00000581979 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
SRSF1-204ENST00000581979 PRM1P04553 51 aa2.79□□□□□ -1.96
SRSF1-204ENST00000581979 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
SRSF1-204ENST00000581979 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
SRSF1-204ENST00000581979 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
SRSF1-204ENST00000581979 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
SRSF1-204ENST00000581979 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
SRSF1-204ENST00000581979 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
SRSF1-204ENST00000581979 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 9 ms