RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 PP632Q6XCG6 107 aa8□□□□□ -1.13
SNX11-209ENST00000581705 PRAC1Q96KF2 57 aa7.94□□□□□ -1.14
SNX11-209ENST00000581705 KRTAP2-2Q9BYT5 123 aa7.9□□□□□ -1.14
SNX11-209ENST00000581705 KRTAP2-1Q9BYU5 128 aa7.9□□□□□ -1.14
SNX11-209ENST00000581705 SPRR2DP22532 72 aa7.89□□□□□ -1.15
SNX11-209ENST00000581705 LCE3AQ5TA76 89 aa7.87□□□□□ -1.15
SNX11-209ENST00000581705 LCE3BQ5TA77 95 aa7.69□□□□□ -1.18
SNX11-209ENST00000581705 SVIPQ8NHG7 77 aa7.63□□□□□ -1.19
SNX11-209ENST00000581705 KRTAP12-3P60328 96 aa7.62□□□□□ -1.19
SNX11-209ENST00000581705 KRTAP19-5Q3LI72 72 aa7.61□□□□□ -1.19
SNX11-209ENST00000581705 KRTAP19-7Q3SYF9 63 aa7.58□□□□□ -1.2
SNX11-209ENST00000581705 MT1EP04732 61 aa7.47□□□□□ -1.21
SNX11-209ENST00000581705 LCE5AQ5TCM9 118 aa7.44□□□□□ -1.22
SNX11-209ENST00000581705 KRTAP15-1Q3LI76 137 aa7.44□□□□□ -1.22
SNX11-209ENST00000581705 KRTAP19-3Q7Z4W3 81 aa7.39□□□□□ -1.23
SNX11-209ENST00000581705 DSTQ03001 7570 aaKnown RBP7.37□□□□□ -1.23
SNX11-209ENST00000581705 KRTAP19-4Q3LI73 84 aa7.37□□□□□ -1.23
SNX11-209ENST00000581705 MT1LQ93083 61 aa7.28□□□□□ -1.24
SNX11-209ENST00000581705 GPR98Q8WXG9 6306 aa7.26□□□□□ -1.25
SNX11-209ENST00000581705 MT1GP13640 62 aa7.2□□□□□ -1.26
SNX11-209ENST00000581705 KRTAP4-9Q9BYQ8 210 aa7.19□□□□□ -1.26
SNX11-209ENST00000581705 LCE3CQ5T5A8 94 aa7.1□□□□□ -1.27
SNX11-209ENST00000581705 MT1MQ8N339 61 aa7.07□□□□□ -1.28
SNX11-209ENST00000581705 LCE1DQ5T752 114 aa7.01□□□□□ -1.29
SNX11-209ENST00000581705 LCE4AQ5TA78 99 aa6.98□□□□□ -1.29
SNX11-209ENST00000581705 SPRR5A0A1B0GTR4 108 aa6.96□□□□□ -1.3
SNX11-209ENST00000581705 HMCN1Q96RW7 5635 aa6.95□□□□□ -1.3
SNX11-209ENST00000581705 MT4P47944 62 aa6.91□□□□□ -1.3
SNX11-209ENST00000581705 KRTAP4-3Q9BYR4 195 aa6.91□□□□□ -1.3
SNX11-209ENST00000581705 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.31
SNX11-209ENST00000581705 KRTAP5-4Q6L8H1 288 aa6.84□□□□□ -1.31
SNX11-209ENST00000581705 AHNAK2Q8IVF2 5795 aa6.77□□□□□ -1.33
SNX11-209ENST00000581705 KRTAP4-6Q9BYQ5 205 aa6.72□□□□□ -1.33
SNX11-209ENST00000581705 LUZP6Q538Z0 58 aa6.64□□□□□ -1.35
SNX11-209ENST00000581705 KRTAP9-6A8MVA2 160 aa6.63□□□□□ -1.35
SNX11-209ENST00000581705 KRTAP5-10Q6L8G5 202 aa6.6□□□□□ -1.35
SNX11-209ENST00000581705 KRTAP5-5Q701N2 237 aaPredicted RBP6.52□□□□□ -1.37
SNX11-209ENST00000581705 LOC100996750A0A140TA64 210 aa6.49□□□□□ -1.37
SNX11-209ENST00000581705 KRTAP20-2Q3LI61 65 aa6.46□□□□□ -1.38
SNX11-209ENST00000581705 KRTAP5-3Q6L8H2 238 aa6.42□□□□□ -1.38
SNX11-209ENST00000581705 KRTAP12-4P60329 112 aa6.37□□□□□ -1.39
SNX11-209ENST00000581705 KRTAP5-7Q6L8G8 165 aa6.36□□□□□ -1.39
SNX11-209ENST00000581705 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
SNX11-209ENST00000581705 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
SNX11-209ENST00000581705 MT1AP04731 61 aa6.24□□□□□ -1.41
SNX11-209ENST00000581705 KRTAP6-1Q3LI64 71 aa6.09□□□□□ -1.43
SNX11-209ENST00000581705 KRTAP5-2Q701N4 177 aa5.98□□□□□ -1.45
SNX11-209ENST00000581705 KRTAP4-11Q9BYQ6 195 aa5.93□□□□□ -1.46
SNX11-209ENST00000581705 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
SNX11-209ENST00000581705 H3BS24 57 aa5.85□□□□□ -1.47
SNX11-209ENST00000581705 KRTAP6-2Q3LI66 62 aa5.74□□□□□ -1.49
SNX11-209ENST00000581705 KRTAP5-8O75690 187 aa5.74□□□□□ -1.49
SNX11-209ENST00000581705 MT3P25713 68 aa5.67□□□□□ -1.5
SNX11-209ENST00000581705 AHNAKQ09666 5890 aaKnown RBP5.63□□□□□ -1.51
SNX11-209ENST00000581705 OBSCNQ5VST9 7968 aa5.62□□□□□ -1.51
SNX11-209ENST00000581705 KRTAP4-12Q9BQ66 201 aa5.61□□□□□ -1.51
SNX11-209ENST00000581705 MUC5ACP98088 5654 aa5.6□□□□□ -1.51
SNX11-209ENST00000581705 MUC5BQ9HC84 5762 aaPredicted RBP5.59□□□□□ -1.51
SNX11-209ENST00000581705 A0A0A0MQY5 61 aa5.54□□□□□ -1.52
SNX11-209ENST00000581705 KRTAP9-9Q9BYP9 154 aa5.46□□□□□ -1.54
SNX11-209ENST00000581705 KRTAP5-1Q6L8H4 278 aa5.38□□□□□ -1.55
SNX11-209ENST00000581705 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
SNX11-209ENST00000581705 INE1O15225 51 aa5.28□□□□□ -1.56
SNX11-209ENST00000581705 LCE3EQ5T5B0 92 aa5.15□□□□□ -1.58
SNX11-209ENST00000581705 LCE1EQ5T753 118 aa5.11□□□□□ -1.59
SNX11-209ENST00000581705 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
SNX11-209ENST00000581705 LCE1BQ5T7P3 118 aa4.79□□□□□ -1.64
SNX11-209ENST00000581705 LCE1CQ5T751 118 aa4.73□□□□□ -1.65
SNX11-209ENST00000581705 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
SNX11-209ENST00000581705 PRM1P04553 51 aa4.34□□□□□ -1.71
SNX11-209ENST00000581705 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
SNX11-209ENST00000581705 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
SNX11-209ENST00000581705 KRTAP21-2Q3LI59 83 aa4.03□□□□□ -1.76
SNX11-209ENST00000581705 PHGR1C9JFL3 82 aa3.84□□□□□ -1.79
SNX11-209ENST00000581705 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
SNX11-209ENST00000581705 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
SNX11-209ENST00000581705 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
SNX11-209ENST00000581705 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 154.5 ms