RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
TRAF4-214ENST00000580073 A6NED7 52 aa4.89□□□□□ -1.63
TRAF4-214ENST00000580073 MT1GP13640 62 aa4.89□□□□□ -1.63
TRAF4-214ENST00000580073 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
TRAF4-214ENST00000580073 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
TRAF4-214ENST00000580073 TNP1P09430 55 aa4.83□□□□□ -1.64
TRAF4-214ENST00000580073 LCE3AQ5TA76 89 aa4.82□□□□□ -1.64
TRAF4-214ENST00000580073 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
TRAF4-214ENST00000580073 MT4P47944 62 aa4.8□□□□□ -1.64
TRAF4-214ENST00000580073 K7ERS5 55 aa4.76□□□□□ -1.65
TRAF4-214ENST00000580073 MT1MQ8N339 61 aa4.76□□□□□ -1.65
TRAF4-214ENST00000580073 HMCN1Q96RW7 5635 aa4.76□□□□□ -1.65
TRAF4-214ENST00000580073 CDC42SE1Q9NRR8 79 aa4.74□□□□□ -1.65
TRAF4-214ENST00000580073 MT1LQ93083 61 aa4.72□□□□□ -1.65
TRAF4-214ENST00000580073 KRTAP25-1Q3LHN0 102 aa4.69□□□□□ -1.66
TRAF4-214ENST00000580073 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
TRAF4-214ENST00000580073 AHNAK2Q8IVF2 5795 aa4.68□□□□□ -1.66
TRAF4-214ENST00000580073 KRTAP5-10Q6L8G5 202 aa4.65□□□□□ -1.67
TRAF4-214ENST00000580073 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
TRAF4-214ENST00000580073 ROMO1P60602 79 aa4.59□□□□□ -1.67
TRAF4-214ENST00000580073 KRTAP4-6Q9BYQ5 205 aa4.58□□□□□ -1.68
TRAF4-214ENST00000580073 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
TRAF4-214ENST00000580073 KRTAP5-7Q6L8G8 165 aa4.54□□□□□ -1.68
TRAF4-214ENST00000580073 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
TRAF4-214ENST00000580073 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
TRAF4-214ENST00000580073 KRTAP4-7Q9BYR0 210 aa4.49□□□□□ -1.69
TRAF4-214ENST00000580073 BRK1Q8WUW1 75 aa4.48□□□□□ -1.69
TRAF4-214ENST00000580073 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
TRAF4-214ENST00000580073 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
TRAF4-214ENST00000580073 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
TRAF4-214ENST00000580073 KRTAP15-1Q3LI76 137 aa4.38□□□□□ -1.71
TRAF4-214ENST00000580073 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
TRAF4-214ENST00000580073 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
TRAF4-214ENST00000580073 KRTAP19-4Q3LI73 84 aa4.3□□□□□ -1.72
TRAF4-214ENST00000580073 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
TRAF4-214ENST00000580073 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
TRAF4-214ENST00000580073 PMAIP1Q13794 54 aa4.22□□□□□ -1.73
TRAF4-214ENST00000580073 PRO0628Q9UI54 55 aa4.22□□□□□ -1.73
TRAF4-214ENST00000580073 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
TRAF4-214ENST00000580073 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
TRAF4-214ENST00000580073 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
TRAF4-214ENST00000580073 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
TRAF4-214ENST00000580073 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
TRAF4-214ENST00000580073 MT1AP04731 61 aa4.04□□□□□ -1.76
TRAF4-214ENST00000580073 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
TRAF4-214ENST00000580073 KRTAP5-8O75690 187 aa3.96□□□□□ -1.78
TRAF4-214ENST00000580073 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
TRAF4-214ENST00000580073 MUC5ACP98088 5654 aa3.9□□□□□ -1.78
TRAF4-214ENST00000580073 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.79
TRAF4-214ENST00000580073 KTN1-AS1Q86SY8 53 aa3.88□□□□□ -1.79
TRAF4-214ENST00000580073 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
TRAF4-214ENST00000580073 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
TRAF4-214ENST00000580073 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
TRAF4-214ENST00000580073 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
TRAF4-214ENST00000580073 MT3P25713 68 aa3.73□□□□□ -1.81
TRAF4-214ENST00000580073 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
TRAF4-214ENST00000580073 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
TRAF4-214ENST00000580073 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
TRAF4-214ENST00000580073 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
TRAF4-214ENST00000580073 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
TRAF4-214ENST00000580073 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
TRAF4-214ENST00000580073 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
TRAF4-214ENST00000580073 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
TRAF4-214ENST00000580073 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
TRAF4-214ENST00000580073 H3BS24 57 aa2.98□□□□□ -1.93
TRAF4-214ENST00000580073 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
TRAF4-214ENST00000580073 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
TRAF4-214ENST00000580073 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
TRAF4-214ENST00000580073 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
TRAF4-214ENST00000580073 A0A0A0MQY5 61 aa2.84□□□□□ -1.95
TRAF4-214ENST00000580073 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
TRAF4-214ENST00000580073 INE1O15225 51 aa2.61□□□□□ -1.99
TRAF4-214ENST00000580073 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
TRAF4-214ENST00000580073 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
TRAF4-214ENST00000580073 PRM1P04553 51 aa2.39□□□□□ -2.03
TRAF4-214ENST00000580073 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
TRAF4-214ENST00000580073 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
TRAF4-214ENST00000580073 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms