RNA–Protein interactions for RNA: ENST00000580013.5

TSEN54-207, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 4

Gene TSEN54, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-207ENST00000580013 KRTAP19-3Q7Z4W3 81 aa7.86□□□□□ -1.15
TSEN54-207ENST00000580013 MT1GP13640 62 aa7.74□□□□□ -1.17
TSEN54-207ENST00000580013 MT1LQ93083 61 aa7.74□□□□□ -1.17
TSEN54-207ENST00000580013 KRTAP23-1A1A580 65 aa7.7□□□□□ -1.18
TSEN54-207ENST00000580013 KRTAP12-3P60328 96 aa7.7□□□□□ -1.18
TSEN54-207ENST00000580013 ROMO1P60602 79 aa7.68□□□□□ -1.18
TSEN54-207ENST00000580013 KRTAP2-2Q9BYT5 123 aa7.68□□□□□ -1.18
TSEN54-207ENST00000580013 KRTAP2-1Q9BYU5 128 aa7.68□□□□□ -1.18
TSEN54-207ENST00000580013 LCE3BQ5TA77 95 aa7.67□□□□□ -1.18
TSEN54-207ENST00000580013 MT1MQ8N339 61 aa7.6□□□□□ -1.19
TSEN54-207ENST00000580013 PP632Q6XCG6 107 aa7.58□□□□□ -1.2
TSEN54-207ENST00000580013 DSTQ03001 7570 aaKnown RBP7.47□□□□□ -1.21
TSEN54-207ENST00000580013 KRTAP4-3Q9BYR4 195 aa7.42□□□□□ -1.22
TSEN54-207ENST00000580013 BRK1Q8WUW1 75 aa7.41□□□□□ -1.22
TSEN54-207ENST00000580013 KRTAP4-7Q9BYR0 210 aa7.39□□□□□ -1.23
TSEN54-207ENST00000580013 KRTAP19-4Q3LI73 84 aa7.35□□□□□ -1.23
TSEN54-207ENST00000580013 KRTAP15-1Q3LI76 137 aa7.35□□□□□ -1.23
TSEN54-207ENST00000580013 LCE3CQ5T5A8 94 aa7.15□□□□□ -1.26
TSEN54-207ENST00000580013 KRTAP5-4Q6L8H1 288 aa7.07□□□□□ -1.28
TSEN54-207ENST00000580013 LCE4AQ5TA78 99 aa7.05□□□□□ -1.28
TSEN54-207ENST00000580013 KRTAP4-9Q9BYQ8 210 aa7.04□□□□□ -1.28
TSEN54-207ENST00000580013 PMAIP1Q13794 54 aa7.02□□□□□ -1.29
TSEN54-207ENST00000580013 KRTAP5-5Q701N2 237 aaPredicted RBP6.99□□□□□ -1.29
TSEN54-207ENST00000580013 LOC100996750A0A140TA64 210 aa6.97□□□□□ -1.29
TSEN54-207ENST00000580013 LCE1DQ5T752 114 aa6.94□□□□□ -1.3
TSEN54-207ENST00000580013 MT4P47944 62 aa6.86□□□□□ -1.31
TSEN54-207ENST00000580013 PRO0628Q9UI54 55 aa6.85□□□□□ -1.31
TSEN54-207ENST00000580013 HMCN1Q96RW7 5635 aa6.85□□□□□ -1.31
TSEN54-207ENST00000580013 KRTAP9-6A8MVA2 160 aa6.8□□□□□ -1.32
TSEN54-207ENST00000580013 KRTAP4-6Q9BYQ5 205 aa6.8□□□□□ -1.32
TSEN54-207ENST00000580013 PRAC1Q96KF2 57 aa6.7□□□□□ -1.34
TSEN54-207ENST00000580013 SYNE1Q8NF91 8797 aaKnown RBP6.64□□□□□ -1.35
TSEN54-207ENST00000580013 SPRR5A0A1B0GTR4 108 aa6.62□□□□□ -1.35
TSEN54-207ENST00000580013 KRTAP12-4P60329 112 aa6.61□□□□□ -1.35
TSEN54-207ENST00000580013 KRTAP20-2Q3LI61 65 aa6.59□□□□□ -1.35
TSEN54-207ENST00000580013 MT1AP04731 61 aa6.58□□□□□ -1.36
TSEN54-207ENST00000580013 KRTAP6-1Q3LI64 71 aa6.54□□□□□ -1.36
TSEN54-207ENST00000580013 AHNAK2Q8IVF2 5795 aa6.47□□□□□ -1.37
TSEN54-207ENST00000580013 KRTAP5-3Q6L8H2 238 aa6.44□□□□□ -1.38
TSEN54-207ENST00000580013 KTN1-AS1Q86SY8 53 aa6.44□□□□□ -1.38
TSEN54-207ENST00000580013 GPR98Q8WXG9 6306 aa6.43□□□□□ -1.38
TSEN54-207ENST00000580013 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
TSEN54-207ENST00000580013 KRTAP5-10Q6L8G5 202 aa6.28□□□□□ -1.4
TSEN54-207ENST00000580013 KRTAP5-2Q701N4 177 aa6.27□□□□□ -1.41
TSEN54-207ENST00000580013 KRTAP6-2Q3LI66 62 aa6.14□□□□□ -1.43
TSEN54-207ENST00000580013 SVIPQ8NHG7 77 aa6□□□□□ -1.45
TSEN54-207ENST00000580013 MT3P25713 68 aa5.99□□□□□ -1.45
TSEN54-207ENST00000580013 KRTAP5-7Q6L8G8 165 aa5.97□□□□□ -1.45
TSEN54-207ENST00000580013 KRTAP4-11Q9BYQ6 195 aa5.92□□□□□ -1.46
TSEN54-207ENST00000580013 KRTAP5-8O75690 187 aa5.74□□□□□ -1.49
TSEN54-207ENST00000580013 OBSCNQ5VST9 7968 aa5.64□□□□□ -1.51
TSEN54-207ENST00000580013 KRTAP5-1Q6L8H4 278 aa5.55□□□□□ -1.52
TSEN54-207ENST00000580013 LUZP6Q538Z0 58 aa5.5□□□□□ -1.53
TSEN54-207ENST00000580013 LCE1EQ5T753 118 aa5.45□□□□□ -1.54
TSEN54-207ENST00000580013 MUC5ACP98088 5654 aa5.42□□□□□ -1.54
TSEN54-207ENST00000580013 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
TSEN54-207ENST00000580013 MUC5BQ9HC84 5762 aaPredicted RBP5.28□□□□□ -1.56
TSEN54-207ENST00000580013 LCE3DQ9BYE3 92 aa5.22□□□□□ -1.57
TSEN54-207ENST00000580013 AHNAKQ09666 5890 aaKnown RBP5.18□□□□□ -1.58
TSEN54-207ENST00000580013 KRTAP4-2Q9BYR5 136 aa5.12□□□□□ -1.59
TSEN54-207ENST00000580013 LCE1CQ5T751 118 aa5.06□□□□□ -1.6
TSEN54-207ENST00000580013 LCE1BQ5T7P3 118 aa5.06□□□□□ -1.6
TSEN54-207ENST00000580013 LCE3EQ5T5B0 92 aa4.98□□□□□ -1.61
TSEN54-207ENST00000580013 NDUFAF8A1L188 74 aa4.82□□□□□ -1.64
TSEN54-207ENST00000580013 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.67□□□□□ -1.66
TSEN54-207ENST00000580013 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
TSEN54-207ENST00000580013 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
TSEN54-207ENST00000580013 KRTAP21-2Q3LI59 83 aa4.34□□□□□ -1.71
TSEN54-207ENST00000580013 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
TSEN54-207ENST00000580013 INE1O15225 51 aa3.95□□□□□ -1.78
TSEN54-207ENST00000580013 PRM1P04553 51 aa3.94□□□□□ -1.78
TSEN54-207ENST00000580013 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
TSEN54-207ENST00000580013 PHGR1C9JFL3 82 aa3.9□□□□□ -1.79
TSEN54-207ENST00000580013 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
TSEN54-207ENST00000580013 H3BS24 57 aa3.5□□□□□ -1.85
TSEN54-207ENST00000580013 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
TSEN54-207ENST00000580013 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
TSEN54-207ENST00000580013 MUC16Q8WXI7 14507 aa2.57□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 921.5 ms