RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 KRTAP2-1Q9BYU5 128 aa5.79□□□□□ -1.48
IFT20-208ENST00000578985 KRTAP19-7Q3SYF9 63 aa5.76□□□□□ -1.49
IFT20-208ENST00000578985 LCE3AQ5TA76 89 aa5.71□□□□□ -1.5
IFT20-208ENST00000578985 MT1EP04732 61 aa5.7□□□□□ -1.5
IFT20-208ENST00000578985 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
IFT20-208ENST00000578985 KRTAP4-9Q9BYQ8 210 aa5.68□□□□□ -1.5
IFT20-208ENST00000578985 SPRR2DP22532 72 aa5.67□□□□□ -1.5
IFT20-208ENST00000578985 KRTAP25-1Q3LHN0 102 aa5.65□□□□□ -1.5
IFT20-208ENST00000578985 CDC42SE1Q9NRR8 79 aa5.65□□□□□ -1.5
IFT20-208ENST00000578985 GPR98Q8WXG9 6306 aa5.63□□□□□ -1.51
IFT20-208ENST00000578985 KRTAP4-2Q9BYR5 136 aa5.61□□□□□ -1.51
IFT20-208ENST00000578985 KRTAP19-3Q7Z4W3 81 aa5.59□□□□□ -1.51
IFT20-208ENST00000578985 LCE4AQ5TA78 99 aa5.58□□□□□ -1.52
IFT20-208ENST00000578985 LCE5AQ5TCM9 118 aa5.57□□□□□ -1.52
IFT20-208ENST00000578985 MT1GP13640 62 aa5.5□□□□□ -1.53
IFT20-208ENST00000578985 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
IFT20-208ENST00000578985 ROMO1P60602 79 aa5.5□□□□□ -1.53
IFT20-208ENST00000578985 MT1LQ93083 61 aa5.5□□□□□ -1.53
IFT20-208ENST00000578985 KRTAP4-11Q9BYQ6 195 aa5.46□□□□□ -1.54
IFT20-208ENST00000578985 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
IFT20-208ENST00000578985 PP632Q6XCG6 107 aa5.45□□□□□ -1.54
IFT20-208ENST00000578985 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
IFT20-208ENST00000578985 MT1MQ8N339 61 aa5.41□□□□□ -1.54
IFT20-208ENST00000578985 BRK1Q8WUW1 75 aa5.34□□□□□ -1.55
IFT20-208ENST00000578985 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
IFT20-208ENST00000578985 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
IFT20-208ENST00000578985 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
IFT20-208ENST00000578985 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
IFT20-208ENST00000578985 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
IFT20-208ENST00000578985 AHNAK2Q8IVF2 5795 aa5.08□□□□□ -1.6
IFT20-208ENST00000578985 HMCN1Q96RW7 5635 aa5.08□□□□□ -1.6
IFT20-208ENST00000578985 PMAIP1Q13794 54 aa5.04□□□□□ -1.6
IFT20-208ENST00000578985 KRTAP5-10Q6L8G5 202 aa5.03□□□□□ -1.6
IFT20-208ENST00000578985 KRTAP5-4Q6L8H1 288 aa4.98□□□□□ -1.61
IFT20-208ENST00000578985 MT4P47944 62 aa4.96□□□□□ -1.62
IFT20-208ENST00000578985 KRTAP5-5Q701N2 237 aaPredicted RBP4.92□□□□□ -1.62
IFT20-208ENST00000578985 H3BS24 57 aa4.9□□□□□ -1.63
IFT20-208ENST00000578985 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
IFT20-208ENST00000578985 PRO0628Q9UI54 55 aa4.89□□□□□ -1.63
IFT20-208ENST00000578985 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
IFT20-208ENST00000578985 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
IFT20-208ENST00000578985 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
IFT20-208ENST00000578985 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
IFT20-208ENST00000578985 MT1AP04731 61 aa4.68□□□□□ -1.66
IFT20-208ENST00000578985 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
IFT20-208ENST00000578985 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
IFT20-208ENST00000578985 KTN1-AS1Q86SY8 53 aa4.62□□□□□ -1.67
IFT20-208ENST00000578985 SYNE1Q8NF91 8797 aaKnown RBP4.55□□□□□ -1.68
IFT20-208ENST00000578985 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
IFT20-208ENST00000578985 SVIPQ8NHG7 77 aa4.41□□□□□ -1.7
IFT20-208ENST00000578985 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
IFT20-208ENST00000578985 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.72
IFT20-208ENST00000578985 MT3P25713 68 aa4.28□□□□□ -1.72
IFT20-208ENST00000578985 MUC5ACP98088 5654 aa4.27□□□□□ -1.73
IFT20-208ENST00000578985 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
IFT20-208ENST00000578985 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
IFT20-208ENST00000578985 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
IFT20-208ENST00000578985 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
IFT20-208ENST00000578985 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
IFT20-208ENST00000578985 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
IFT20-208ENST00000578985 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
IFT20-208ENST00000578985 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
IFT20-208ENST00000578985 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
IFT20-208ENST00000578985 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
IFT20-208ENST00000578985 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
IFT20-208ENST00000578985 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
IFT20-208ENST00000578985 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
IFT20-208ENST00000578985 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
IFT20-208ENST00000578985 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
IFT20-208ENST00000578985 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
IFT20-208ENST00000578985 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
IFT20-208ENST00000578985 A0A0A0MQY5 61 aa2.88□□□□□ -1.95
IFT20-208ENST00000578985 INE1O15225 51 aa2.84□□□□□ -1.95
IFT20-208ENST00000578985 PRM1P04553 51 aa2.83□□□□□ -1.96
IFT20-208ENST00000578985 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
IFT20-208ENST00000578985 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
IFT20-208ENST00000578985 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 27.8 ms