RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 SPRR2DP22532 72 aa4.27□□□□□ -1.73
CDK5RAP3-210ENST00000578733 LCE3AQ5TA76 89 aa4.27□□□□□ -1.73
CDK5RAP3-210ENST00000578733 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
CDK5RAP3-210ENST00000578733 PRO0628Q9UI54 55 aa4.22□□□□□ -1.73
CDK5RAP3-210ENST00000578733 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
CDK5RAP3-210ENST00000578733 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
CDK5RAP3-210ENST00000578733 GPR98Q8WXG9 6306 aa4.19□□□□□ -1.74
CDK5RAP3-210ENST00000578733 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
CDK5RAP3-210ENST00000578733 KRTAP19-7Q3SYF9 63 aa4.18□□□□□ -1.74
CDK5RAP3-210ENST00000578733 LCE3BQ5TA77 95 aa4.18□□□□□ -1.74
CDK5RAP3-210ENST00000578733 MT1EP04732 61 aa4.15□□□□□ -1.75
CDK5RAP3-210ENST00000578733 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
CDK5RAP3-210ENST00000578733 KRTAP19-3Q7Z4W3 81 aa4.07□□□□□ -1.76
CDK5RAP3-210ENST00000578733 MT1GP13640 62 aa4.03□□□□□ -1.76
CDK5RAP3-210ENST00000578733 MT1LQ93083 61 aa4.02□□□□□ -1.77
CDK5RAP3-210ENST00000578733 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
CDK5RAP3-210ENST00000578733 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
CDK5RAP3-210ENST00000578733 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
CDK5RAP3-210ENST00000578733 KRTAP4-9Q9BYQ8 210 aa3.96□□□□□ -1.78
CDK5RAP3-210ENST00000578733 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
CDK5RAP3-210ENST00000578733 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
CDK5RAP3-210ENST00000578733 MT1MQ8N339 61 aa3.93□□□□□ -1.78
CDK5RAP3-210ENST00000578733 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
CDK5RAP3-210ENST00000578733 LCE1DQ5T752 114 aa3.85□□□□□ -1.79
CDK5RAP3-210ENST00000578733 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
CDK5RAP3-210ENST00000578733 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
CDK5RAP3-210ENST00000578733 KRTAP5-10Q6L8G5 202 aa3.79□□□□□ -1.8
CDK5RAP3-210ENST00000578733 KRTAP4-7Q9BYR0 210 aa3.79□□□□□ -1.8
CDK5RAP3-210ENST00000578733 LCE4AQ5TA78 99 aa3.78□□□□□ -1.8
CDK5RAP3-210ENST00000578733 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
CDK5RAP3-210ENST00000578733 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
CDK5RAP3-210ENST00000578733 SVIPQ8NHG7 77 aa3.76□□□□□ -1.81
CDK5RAP3-210ENST00000578733 MT4P47944 62 aa3.74□□□□□ -1.81
CDK5RAP3-210ENST00000578733 KRTAP5-7Q6L8G8 165 aa3.71□□□□□ -1.82
CDK5RAP3-210ENST00000578733 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
CDK5RAP3-210ENST00000578733 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
CDK5RAP3-210ENST00000578733 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
CDK5RAP3-210ENST00000578733 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
CDK5RAP3-210ENST00000578733 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
CDK5RAP3-210ENST00000578733 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
CDK5RAP3-210ENST00000578733 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
CDK5RAP3-210ENST00000578733 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
CDK5RAP3-210ENST00000578733 MT1AP04731 61 aa3.45□□□□□ -1.86
CDK5RAP3-210ENST00000578733 KRTAP12-4P60329 112 aa3.45□□□□□ -1.86
CDK5RAP3-210ENST00000578733 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
CDK5RAP3-210ENST00000578733 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
CDK5RAP3-210ENST00000578733 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
CDK5RAP3-210ENST00000578733 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
CDK5RAP3-210ENST00000578733 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
CDK5RAP3-210ENST00000578733 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
CDK5RAP3-210ENST00000578733 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
CDK5RAP3-210ENST00000578733 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
CDK5RAP3-210ENST00000578733 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
CDK5RAP3-210ENST00000578733 MT3P25713 68 aa3.16□□□□□ -1.9
CDK5RAP3-210ENST00000578733 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
CDK5RAP3-210ENST00000578733 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
CDK5RAP3-210ENST00000578733 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
CDK5RAP3-210ENST00000578733 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
CDK5RAP3-210ENST00000578733 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
CDK5RAP3-210ENST00000578733 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
CDK5RAP3-210ENST00000578733 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
CDK5RAP3-210ENST00000578733 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
CDK5RAP3-210ENST00000578733 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
CDK5RAP3-210ENST00000578733 A0A0A0MQY5 61 aa2.63□□□□□ -1.99
CDK5RAP3-210ENST00000578733 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
CDK5RAP3-210ENST00000578733 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
CDK5RAP3-210ENST00000578733 INE1O15225 51 aa2.52□□□□□ -2.01
CDK5RAP3-210ENST00000578733 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
CDK5RAP3-210ENST00000578733 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
CDK5RAP3-210ENST00000578733 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
CDK5RAP3-210ENST00000578733 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
CDK5RAP3-210ENST00000578733 PRM1P04553 51 aa2.23□□□□□ -2.05
CDK5RAP3-210ENST00000578733 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
CDK5RAP3-210ENST00000578733 H3BS24 57 aa2.09□□□□□ -2.07
CDK5RAP3-210ENST00000578733 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
CDK5RAP3-210ENST00000578733 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
CDK5RAP3-210ENST00000578733 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
CDK5RAP3-210ENST00000578733 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 8.1 ms