RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 LCE5AQ5TCM9 118 aa8.62□□□□□ -1.03
ERBB2-209ENST00000578709 MT1GP13640 62 aa8.49□□□□□ -1.05
ERBB2-209ENST00000578709 MT1LQ93083 61 aa8.48□□□□□ -1.05
ERBB2-209ENST00000578709 LCE3BQ5TA77 95 aa8.47□□□□□ -1.05
ERBB2-209ENST00000578709 KRTAP2-2Q9BYT5 123 aa8.47□□□□□ -1.05
ERBB2-209ENST00000578709 KRTAP2-1Q9BYU5 128 aa8.47□□□□□ -1.05
ERBB2-209ENST00000578709 KRTAP12-3P60328 96 aa8.45□□□□□ -1.06
ERBB2-209ENST00000578709 KRTAP23-1A1A580 65 aa8.41□□□□□ -1.06
ERBB2-209ENST00000578709 ROMO1P60602 79 aa8.4□□□□□ -1.06
ERBB2-209ENST00000578709 PP632Q6XCG6 107 aa8.4□□□□□ -1.06
ERBB2-209ENST00000578709 MT1MQ8N339 61 aa8.35□□□□□ -1.07
ERBB2-209ENST00000578709 DSTQ03001 7570 aaKnown RBP8.22□□□□□ -1.09
ERBB2-209ENST00000578709 BRK1Q8WUW1 75 aa8.11□□□□□ -1.11
ERBB2-209ENST00000578709 KRTAP4-3Q9BYR4 195 aa8.11□□□□□ -1.11
ERBB2-209ENST00000578709 KRTAP4-7Q9BYR0 210 aa8.06□□□□□ -1.12
ERBB2-209ENST00000578709 KRTAP19-4Q3LI73 84 aa8.05□□□□□ -1.12
ERBB2-209ENST00000578709 KRTAP15-1Q3LI76 137 aa8.04□□□□□ -1.12
ERBB2-209ENST00000578709 LCE3CQ5T5A8 94 aa7.83□□□□□ -1.16
ERBB2-209ENST00000578709 LCE4AQ5TA78 99 aa7.78□□□□□ -1.16
ERBB2-209ENST00000578709 KRTAP4-9Q9BYQ8 210 aa7.75□□□□□ -1.17
ERBB2-209ENST00000578709 KRTAP5-4Q6L8H1 288 aa7.74□□□□□ -1.17
ERBB2-209ENST00000578709 LCE1DQ5T752 114 aa7.66□□□□□ -1.18
ERBB2-209ENST00000578709 PMAIP1Q13794 54 aa7.65□□□□□ -1.18
ERBB2-209ENST00000578709 KRTAP5-5Q701N2 237 aaPredicted RBP7.64□□□□□ -1.19
ERBB2-209ENST00000578709 LOC100996750A0A140TA64 210 aa7.62□□□□□ -1.19
ERBB2-209ENST00000578709 MT4P47944 62 aa7.6□□□□□ -1.19
ERBB2-209ENST00000578709 HMCN1Q96RW7 5635 aa7.55□□□□□ -1.2
ERBB2-209ENST00000578709 KRTAP4-6Q9BYQ5 205 aa7.46□□□□□ -1.22
ERBB2-209ENST00000578709 PRO0628Q9UI54 55 aa7.45□□□□□ -1.22
ERBB2-209ENST00000578709 KRTAP9-6A8MVA2 160 aa7.38□□□□□ -1.23
ERBB2-209ENST00000578709 KRTAP12-4P60329 112 aa7.31□□□□□ -1.24
ERBB2-209ENST00000578709 SPRR5A0A1B0GTR4 108 aa7.29□□□□□ -1.24
ERBB2-209ENST00000578709 PRAC1Q96KF2 57 aa7.28□□□□□ -1.24
ERBB2-209ENST00000578709 KRTAP20-2Q3LI61 65 aa7.25□□□□□ -1.25
ERBB2-209ENST00000578709 MT1AP04731 61 aa7.23□□□□□ -1.25
ERBB2-209ENST00000578709 SYNE1Q8NF91 8797 aaKnown RBP7.21□□□□□ -1.25
ERBB2-209ENST00000578709 GPR98Q8WXG9 6306 aa7.18□□□□□ -1.26
ERBB2-209ENST00000578709 KRTAP6-1Q3LI64 71 aa7.15□□□□□ -1.26
ERBB2-209ENST00000578709 AHNAK2Q8IVF2 5795 aa7.13□□□□□ -1.27
ERBB2-209ENST00000578709 KRTAP5-3Q6L8H2 238 aa7.04□□□□□ -1.28
ERBB2-209ENST00000578709 KTN1-AS1Q86SY8 53 aa7.02□□□□□ -1.29
ERBB2-209ENST00000578709 KRTAP9-4Q9BYQ2 154 aa6.94□□□□□ -1.3
ERBB2-209ENST00000578709 KRTAP5-10Q6L8G5 202 aa6.92□□□□□ -1.3
ERBB2-209ENST00000578709 KRTAP5-2Q701N4 177 aa6.86□□□□□ -1.31
ERBB2-209ENST00000578709 KRTAP6-2Q3LI66 62 aa6.75□□□□□ -1.33
ERBB2-209ENST00000578709 SVIPQ8NHG7 77 aa6.64□□□□□ -1.35
ERBB2-209ENST00000578709 KRTAP5-7Q6L8G8 165 aa6.6□□□□□ -1.35
ERBB2-209ENST00000578709 MT3P25713 68 aa6.58□□□□□ -1.36
ERBB2-209ENST00000578709 KRTAP4-11Q9BYQ6 195 aa6.52□□□□□ -1.37
ERBB2-209ENST00000578709 KRTAP5-8O75690 187 aa6.3□□□□□ -1.4
ERBB2-209ENST00000578709 OBSCNQ5VST9 7968 aa6.22□□□□□ -1.41
ERBB2-209ENST00000578709 LUZP6Q538Z0 58 aa6.08□□□□□ -1.44
ERBB2-209ENST00000578709 KRTAP5-1Q6L8H4 278 aa6.07□□□□□ -1.44
ERBB2-209ENST00000578709 LCE1EQ5T753 118 aa5.97□□□□□ -1.45
ERBB2-209ENST00000578709 MUC5ACP98088 5654 aa5.91□□□□□ -1.46
ERBB2-209ENST00000578709 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
ERBB2-209ENST00000578709 MUC5BQ9HC84 5762 aaPredicted RBP5.8□□□□□ -1.48
ERBB2-209ENST00000578709 AHNAKQ09666 5890 aaKnown RBP5.74□□□□□ -1.49
ERBB2-209ENST00000578709 LCE3DQ9BYE3 92 aa5.72□□□□□ -1.49
ERBB2-209ENST00000578709 KRTAP4-2Q9BYR5 136 aa5.6□□□□□ -1.51
ERBB2-209ENST00000578709 LCE1CQ5T751 118 aa5.54□□□□□ -1.52
ERBB2-209ENST00000578709 LCE1BQ5T7P3 118 aa5.54□□□□□ -1.52
ERBB2-209ENST00000578709 LCE3EQ5T5B0 92 aa5.45□□□□□ -1.54
ERBB2-209ENST00000578709 NDUFAF8A1L188 74 aa5.24□□□□□ -1.57
ERBB2-209ENST00000578709 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.11□□□□□ -1.59
ERBB2-209ENST00000578709 KRTAP5-11Q6L8G4 156 aa4.98□□□□□ -1.61
ERBB2-209ENST00000578709 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
ERBB2-209ENST00000578709 LCE1FQ5T754 118 aa4.75□□□□□ -1.65
ERBB2-209ENST00000578709 KRTAP21-2Q3LI59 83 aa4.72□□□□□ -1.65
ERBB2-209ENST00000578709 A0A0A0MQY5 61 aa4.33□□□□□ -1.72
ERBB2-209ENST00000578709 PRM1P04553 51 aa4.31□□□□□ -1.72
ERBB2-209ENST00000578709 INE1O15225 51 aa4.3□□□□□ -1.72
ERBB2-209ENST00000578709 PHGR1C9JFL3 82 aa4.29□□□□□ -1.72
ERBB2-209ENST00000578709 KRTAP4-4Q9BYR3 166 aa4.22□□□□□ -1.73
ERBB2-209ENST00000578709 H3BS24 57 aa3.85□□□□□ -1.79
ERBB2-209ENST00000578709 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
ERBB2-209ENST00000578709 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
ERBB2-209ENST00000578709 MUC16Q8WXI7 14507 aa2.77□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 84.3 ms