RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 TLN2Q9Y4G6 2542 aa0.73□□□□□ -2.29
TRAPPC8-205ENST00000578658 MUC17Q685J3 4493 aa0.72□□□□□ -2.29
TRAPPC8-205ENST00000578658 UNC80Q8N2C7 3258 aa0.71□□□□□ -2.3
TRAPPC8-205ENST00000578658 CENPEQ02224 2701 aa0.71□□□□□ -2.3
TRAPPC8-205ENST00000578658 CEP295Q9C0D2 2601 aa0.71□□□□□ -2.3
TRAPPC8-205ENST00000578658 DNHD1Q96M86 4753 aa0.71□□□□□ -2.3
TRAPPC8-205ENST00000578658 RYR3Q15413 4870 aa0.7□□□□□ -2.3
TRAPPC8-205ENST00000578658 MYO15AQ9UKN7 3530 aa0.7□□□□□ -2.3
TRAPPC8-205ENST00000578658 BRCA2P51587 3418 aa0.7□□□□□ -2.3
TRAPPC8-205ENST00000578658 SYNE1Q8NF91 8797 aaKnown RBP0.69□□□□□ -2.3
TRAPPC8-205ENST00000578658 SPRR2DP22532 72 aa0.69□□□□□ -2.3
TRAPPC8-205ENST00000578658 IGSF10Q6WRI0 2623 aa0.68□□□□□ -2.3
TRAPPC8-205ENST00000578658 CENPFP49454 3210 aa0.68□□□□□ -2.3
TRAPPC8-205ENST00000578658 LRP1BQ9NZR2 4599 aa0.68□□□□□ -2.3
TRAPPC8-205ENST00000578658 SPRR2BP35325 72 aa0.68□□□□□ -2.3
TRAPPC8-205ENST00000578658 CD52P31358 61 aa0.67□□□□□ -2.3
TRAPPC8-205ENST00000578658 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
TRAPPC8-205ENST00000578658 MGAM2Q2M2H8 2515 aa0.66□□□□□ -2.3
TRAPPC8-205ENST00000578658 BIRC6Q9NR09 4857 aa0.65□□□□□ -2.3
TRAPPC8-205ENST00000578658 MYO9AB2RTY4 2548 aa0.65□□□□□ -2.31
TRAPPC8-205ENST00000578658 SPRR2AP35326 72 aa0.65□□□□□ -2.31
TRAPPC8-205ENST00000578658 KRTAP6-2Q3LI66 62 aa0.65□□□□□ -2.31
TRAPPC8-205ENST00000578658 MACF1Q9UPN3 7388 aaKnown RBP0.65□□□□□ -2.31
TRAPPC8-205ENST00000578658 WDFY3Q8IZQ1 3526 aa0.65□□□□□ -2.31
TRAPPC8-205ENST00000578658 AHNAK2Q8IVF2 5795 aa0.65□□□□□ -2.31
TRAPPC8-205ENST00000578658 EPPK1P58107 5090 aaKnown RBP0.65□□□□□ -2.31
TRAPPC8-205ENST00000578658 HYDINQ4G0P3 5121 aa0.63□□□□□ -2.31
TRAPPC8-205ENST00000578658 KMT2CQ8NEZ4 4911 aaKnown RBP0.63□□□□□ -2.31
TRAPPC8-205ENST00000578658 DNAH14Q0VDD8 3507 aa0.63□□□□□ -2.31
TRAPPC8-205ENST00000578658 HTN3P15516 51 aa0.63□□□□□ -2.31
TRAPPC8-205ENST00000578658 RYR2Q92736 4967 aa0.63□□□□□ -2.31
TRAPPC8-205ENST00000578658 STARD9Q9P2P6 4700 aa0.62□□□□□ -2.31
TRAPPC8-205ENST00000578658 SPTAN1Q13813 2472 aaKnown RBP0.61□□□□□ -2.31
TRAPPC8-205ENST00000578658 HERC1Q15751 4861 aa0.61□□□□□ -2.31
TRAPPC8-205ENST00000578658 SPRR2FQ96RM1 72 aa0.61□□□□□ -2.31
TRAPPC8-205ENST00000578658 NEBP20929 6669 aa0.61□□□□□ -2.31
TRAPPC8-205ENST00000578658 STAB2Q8WWQ8 2551 aa0.61□□□□□ -2.31
TRAPPC8-205ENST00000578658 ABCA13Q86UQ4 5058 aa0.61□□□□□ -2.31
TRAPPC8-205ENST00000578658 SYNE2Q8WXH0 6885 aaKnown RBP0.61□□□□□ -2.31
TRAPPC8-205ENST00000578658 TLN1Q9Y490 2541 aaKnown RBP0.6□□□□□ -2.31
TRAPPC8-205ENST00000578658 AHNAKQ09666 5890 aaKnown RBP0.59□□□□□ -2.31
TRAPPC8-205ENST00000578658 FSIP2Q5CZC0 6907 aa0.59□□□□□ -2.31
TRAPPC8-205ENST00000578658 LRP2P98164 4655 aa0.58□□□□□ -2.32
TRAPPC8-205ENST00000578658 DEFB4AO15263 64 aa0.58□□□□□ -2.32
TRAPPC8-205ENST00000578658 SPRR2EP22531 72 aa0.58□□□□□ -2.32
TRAPPC8-205ENST00000578658 FAT4Q6V0I7 4981 aa0.58□□□□□ -2.32
TRAPPC8-205ENST00000578658 CDH23Q9H251 3354 aa0.57□□□□□ -2.32
TRAPPC8-205ENST00000578658 MT1EP04732 61 aa0.57□□□□□ -2.32
TRAPPC8-205ENST00000578658 SSPOA2VEC9 5147 aa0.57□□□□□ -2.32
TRAPPC8-205ENST00000578658 DSTQ03001 7570 aaKnown RBP0.57□□□□□ -2.32
TRAPPC8-205ENST00000578658 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
TRAPPC8-205ENST00000578658 HERC2O95714 4834 aa0.54□□□□□ -2.32
TRAPPC8-205ENST00000578658 KRTAP20-1Q3LI63 56 aa0.54□□□□□ -2.32
TRAPPC8-205ENST00000578658 MT1LQ93083 61 aa0.53□□□□□ -2.32
TRAPPC8-205ENST00000578658 MDN1Q9NU22 5596 aa0.52□□□□□ -2.33
TRAPPC8-205ENST00000578658 MT1HP80294 61 aa0.51□□□□□ -2.33
TRAPPC8-205ENST00000578658 RNF213Q63HN8 5207 aa0.51□□□□□ -2.33
TRAPPC8-205ENST00000578658 SPRR2GQ9BYE4 73 aa0.51□□□□□ -2.33
TRAPPC8-205ENST00000578658 KMT2DO14686 5537 aa0.49□□□□□ -2.33
TRAPPC8-205ENST00000578658 HMCN2Q8NDA2 5059 aa0.49□□□□□ -2.33
TRAPPC8-205ENST00000578658 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
TRAPPC8-205ENST00000578658 MUC12Q9UKN1 5478 aa0.44□□□□□ -2.34
TRAPPC8-205ENST00000578658 MT1XP80297 61 aa0.43□□□□□ -2.34
TRAPPC8-205ENST00000578658 KRTAP19-8Q3LI54 63 aa0.42□□□□□ -2.34
TRAPPC8-205ENST00000578658 USH2AO75445 5202 aa0.42□□□□□ -2.34
TRAPPC8-205ENST00000578658 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
TRAPPC8-205ENST00000578658 KRTAP19-7Q3SYF9 63 aa0.38□□□□□ -2.35
TRAPPC8-205ENST00000578658 KRTAP19-2Q3LHN2 52 aa0.37□□□□□ -2.35
TRAPPC8-205ENST00000578658 MT1GP13640 62 aa0.35□□□□□ -2.35
TRAPPC8-205ENST00000578658 MT2AP02795 61 aa0.32□□□□□ -2.36
TRAPPC8-205ENST00000578658 KRTAP6-1Q3LI64 71 aa0.32□□□□□ -2.36
TRAPPC8-205ENST00000578658 MT1MQ8N339 61 aa0.32□□□□□ -2.36
TRAPPC8-205ENST00000578658 MT1BP07438 61 aa0.31□□□□□ -2.36
TRAPPC8-205ENST00000578658 MT1HL1P0DM35 61 aa0.24□□□□□ -2.37
TRAPPC8-205ENST00000578658 KRTAP19-6Q3LI70 58 aa0.24□□□□□ -2.37
TRAPPC8-205ENST00000578658 MT1FP04733 61 aa0.21□□□□□ -2.38
TRAPPC8-205ENST00000578658 MT4P47944 62 aa0.19□□□□□ -2.38
TRAPPC8-205ENST00000578658 KRTAP20-2Q3LI61 65 aa0.1□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 80.4 ms