RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 SPRR2AP35326 72 aa6.57□□□□□ -1.36
SREBF1-218ENST00000578469 SPRR2FQ96RM1 72 aa6.56□□□□□ -1.36
SREBF1-218ENST00000578469 KRTAP8-1Q8IUC2 63 aa6.55□□□□□ -1.36
SREBF1-218ENST00000578469 KRTAP2-2Q9BYT5 123 aa6.48□□□□□ -1.37
SREBF1-218ENST00000578469 KRTAP2-1Q9BYU5 128 aa6.48□□□□□ -1.37
SREBF1-218ENST00000578469 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
SREBF1-218ENST00000578469 KRTAP4-8A0A0G2JLE6 195 aa6.38□□□□□ -1.39
SREBF1-218ENST00000578469 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
SREBF1-218ENST00000578469 SPRR2DP22532 72 aa6.37□□□□□ -1.39
SREBF1-218ENST00000578469 LCE1AQ5T7P2 110 aa6.37□□□□□ -1.39
SREBF1-218ENST00000578469 KRTAP19-5Q3LI72 72 aa6.33□□□□□ -1.4
SREBF1-218ENST00000578469 KRTAP15-1Q3LI76 137 aa6.32□□□□□ -1.4
SREBF1-218ENST00000578469 LCE3BQ5TA77 95 aa6.21□□□□□ -1.42
SREBF1-218ENST00000578469 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
SREBF1-218ENST00000578469 GPR98Q8WXG9 6306 aa6.15□□□□□ -1.42
SREBF1-218ENST00000578469 MT1EP04732 61 aa6.12□□□□□ -1.43
SREBF1-218ENST00000578469 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
SREBF1-218ENST00000578469 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
SREBF1-218ENST00000578469 KRTAP4-12Q9BQ66 201 aa6.04□□□□□ -1.44
SREBF1-218ENST00000578469 LUZP6Q538Z0 58 aa6.02□□□□□ -1.45
SREBF1-218ENST00000578469 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
SREBF1-218ENST00000578469 MT1LQ93083 61 aa6□□□□□ -1.45
SREBF1-218ENST00000578469 DSTQ03001 7570 aaKnown RBP5.98□□□□□ -1.45
SREBF1-218ENST00000578469 KRTAP9-9Q9BYP9 154 aa5.91□□□□□ -1.46
SREBF1-218ENST00000578469 KRTAP9-4Q9BYQ2 154 aa5.91□□□□□ -1.46
SREBF1-218ENST00000578469 KRTAP19-3Q7Z4W3 81 aa5.88□□□□□ -1.47
SREBF1-218ENST00000578469 NDUFAF8A1L188 74 aa5.86□□□□□ -1.47
SREBF1-218ENST00000578469 MT1GP13640 62 aa5.85□□□□□ -1.47
SREBF1-218ENST00000578469 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
SREBF1-218ENST00000578469 KRTAP4-7Q9BYR0 210 aa5.78□□□□□ -1.48
SREBF1-218ENST00000578469 MT1MQ8N339 61 aa5.76□□□□□ -1.49
SREBF1-218ENST00000578469 LCE5AQ5TCM9 118 aa5.73□□□□□ -1.49
SREBF1-218ENST00000578469 HMCN1Q96RW7 5635 aa5.68□□□□□ -1.5
SREBF1-218ENST00000578469 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
SREBF1-218ENST00000578469 AHNAK2Q8IVF2 5795 aa5.61□□□□□ -1.51
SREBF1-218ENST00000578469 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
SREBF1-218ENST00000578469 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
SREBF1-218ENST00000578469 LCE4AQ5TA78 99 aa5.59□□□□□ -1.51
SREBF1-218ENST00000578469 MT4P47944 62 aa5.58□□□□□ -1.52
SREBF1-218ENST00000578469 KRTAP5-10Q6L8G5 202 aa5.49□□□□□ -1.53
SREBF1-218ENST00000578469 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.54
SREBF1-218ENST00000578469 KRTAP5-4Q6L8H1 288 aa5.36□□□□□ -1.55
SREBF1-218ENST00000578469 KRTAP5-7Q6L8G8 165 aa5.34□□□□□ -1.55
SREBF1-218ENST00000578469 KRTAP4-11Q9BYQ6 195 aa5.29□□□□□ -1.56
SREBF1-218ENST00000578469 KRTAP5-3Q6L8H2 238 aa5.27□□□□□ -1.57
SREBF1-218ENST00000578469 H3BS24 57 aa5.26□□□□□ -1.57
SREBF1-218ENST00000578469 A0A0A0MQY5 61 aa5.24□□□□□ -1.57
SREBF1-218ENST00000578469 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.59
SREBF1-218ENST00000578469 MT1AP04731 61 aa5.13□□□□□ -1.59
SREBF1-218ENST00000578469 KRTAP20-2Q3LI61 65 aa5.11□□□□□ -1.59
SREBF1-218ENST00000578469 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
SREBF1-218ENST00000578469 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
SREBF1-218ENST00000578469 SYNE1Q8NF91 8797 aaKnown RBP4.93□□□□□ -1.62
SREBF1-218ENST00000578469 INE1O15225 51 aa4.89□□□□□ -1.63
SREBF1-218ENST00000578469 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
SREBF1-218ENST00000578469 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
SREBF1-218ENST00000578469 MUC5BQ9HC84 5762 aaPredicted RBP4.7□□□□□ -1.66
SREBF1-218ENST00000578469 MT3P25713 68 aa4.66□□□□□ -1.66
SREBF1-218ENST00000578469 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
SREBF1-218ENST00000578469 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
SREBF1-218ENST00000578469 KRTAP5-8O75690 187 aa4.6□□□□□ -1.67
SREBF1-218ENST00000578469 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
SREBF1-218ENST00000578469 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
SREBF1-218ENST00000578469 LCE3EQ5T5B0 92 aa4.43□□□□□ -1.7
SREBF1-218ENST00000578469 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
SREBF1-218ENST00000578469 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
SREBF1-218ENST00000578469 PRM1P04553 51 aa3.88□□□□□ -1.79
SREBF1-218ENST00000578469 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
SREBF1-218ENST00000578469 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
SREBF1-218ENST00000578469 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
SREBF1-218ENST00000578469 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
SREBF1-218ENST00000578469 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
SREBF1-218ENST00000578469 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
SREBF1-218ENST00000578469 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
SREBF1-218ENST00000578469 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
SREBF1-218ENST00000578469 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
SREBF1-218ENST00000578469 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
SREBF1-218ENST00000578469 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 118.4 ms