RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 PLAC4Q8WY50 150 aa3.61□□□□□ -1.83
DDX42-204ENST00000577940 SPINT4Q6UDR6 99 aa3.6□□□□□ -1.83
DDX42-204ENST00000577940 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
DDX42-204ENST00000577940 PRO2289Q9P1D8 64 aa3.58□□□□□ -1.84
DDX42-204ENST00000577940 KRTAP20-1Q3LI63 56 aa3.55□□□□□ -1.84
DDX42-204ENST00000577940 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
DDX42-204ENST00000577940 KRTAP12-1P59990 96 aa3.53□□□□□ -1.84
DDX42-204ENST00000577940 KMT2DO14686 5537 aa3.52□□□□□ -1.85
DDX42-204ENST00000577940 KRTAP12-2P59991 146 aa3.52□□□□□ -1.85
DDX42-204ENST00000577940 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
DDX42-204ENST00000577940 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
DDX42-204ENST00000577940 MT1XP80297 61 aa3.47□□□□□ -1.85
DDX42-204ENST00000577940 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
DDX42-204ENST00000577940 KRTAP2-3P0C7H8 128 aa3.45□□□□□ -1.86
DDX42-204ENST00000577940 KRTAP2-4Q9BYR9 128 aa3.45□□□□□ -1.86
DDX42-204ENST00000577940 KRTAP8-1Q8IUC2 63 aa3.44□□□□□ -1.86
DDX42-204ENST00000577940 SPRR2EP22531 72 aa3.43□□□□□ -1.86
DDX42-204ENST00000577940 SPRR2BP35325 72 aa3.43□□□□□ -1.86
DDX42-204ENST00000577940 SPRR2AP35326 72 aa3.43□□□□□ -1.86
DDX42-204ENST00000577940 KRTAP25-1Q3LHN0 102 aa3.39□□□□□ -1.87
DDX42-204ENST00000577940 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
DDX42-204ENST00000577940 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
DDX42-204ENST00000577940 TNP1P09430 55 aa3.35□□□□□ -1.87
DDX42-204ENST00000577940 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
DDX42-204ENST00000577940 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
DDX42-204ENST00000577940 C10orf95Q9H7T3 257 aa3.34□□□□□ -1.88
DDX42-204ENST00000577940 SPRR2DP22532 72 aa3.32□□□□□ -1.88
DDX42-204ENST00000577940 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
DDX42-204ENST00000577940 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
DDX42-204ENST00000577940 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
DDX42-204ENST00000577940 PP632Q6XCG6 107 aa3.21□□□□□ -1.9
DDX42-204ENST00000577940 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
DDX42-204ENST00000577940 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
DDX42-204ENST00000577940 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
DDX42-204ENST00000577940 MT1EP04732 61 aa3.1□□□□□ -1.91
DDX42-204ENST00000577940 KRTAP19-3Q7Z4W3 81 aa3.1□□□□□ -1.91
DDX42-204ENST00000577940 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
DDX42-204ENST00000577940 MT1GP13640 62 aa3.04□□□□□ -1.92
DDX42-204ENST00000577940 KRTAP19-5Q3LI72 72 aa3.04□□□□□ -1.92
DDX42-204ENST00000577940 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
DDX42-204ENST00000577940 DSTQ03001 7570 aaKnown RBP2.99□□□□□ -1.93
DDX42-204ENST00000577940 INE1O15225 51 aa2.96□□□□□ -1.94
DDX42-204ENST00000577940 MT1MQ8N339 61 aa2.94□□□□□ -1.94
DDX42-204ENST00000577940 MT1LQ93083 61 aa2.94□□□□□ -1.94
DDX42-204ENST00000577940 MT4P47944 62 aa2.9□□□□□ -1.95
DDX42-204ENST00000577940 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
DDX42-204ENST00000577940 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
DDX42-204ENST00000577940 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
DDX42-204ENST00000577940 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.96
DDX42-204ENST00000577940 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
DDX42-204ENST00000577940 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
DDX42-204ENST00000577940 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
DDX42-204ENST00000577940 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
DDX42-204ENST00000577940 MT3P25713 68 aa2.73□□□□□ -1.97
DDX42-204ENST00000577940 KRTAP12-4P60329 112 aa2.72□□□□□ -1.97
DDX42-204ENST00000577940 SPRR5A0A1B0GTR4 108 aa2.71□□□□□ -1.98
DDX42-204ENST00000577940 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
DDX42-204ENST00000577940 KRTAP20-2Q3LI61 65 aa2.69□□□□□ -1.98
DDX42-204ENST00000577940 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
DDX42-204ENST00000577940 SYNE1Q8NF91 8797 aaKnown RBP2.57□□□□□ -2
DDX42-204ENST00000577940 MT1AP04731 61 aa2.51□□□□□ -2.01
DDX42-204ENST00000577940 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
DDX42-204ENST00000577940 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
DDX42-204ENST00000577940 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
DDX42-204ENST00000577940 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
DDX42-204ENST00000577940 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
DDX42-204ENST00000577940 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
DDX42-204ENST00000577940 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
DDX42-204ENST00000577940 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
DDX42-204ENST00000577940 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
DDX42-204ENST00000577940 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
DDX42-204ENST00000577940 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
DDX42-204ENST00000577940 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
DDX42-204ENST00000577940 PRM1P04553 51 aa1.74□□□□□ -2.13
DDX42-204ENST00000577940 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
DDX42-204ENST00000577940 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
DDX42-204ENST00000577940 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
DDX42-204ENST00000577940 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 46.8 ms