RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 PLAC4Q8WY50 150 aa4.3□□□□□ -1.72
CRLF3-202ENST00000577725 SPRR2FQ96RM1 72 aa4.25□□□□□ -1.73
CRLF3-202ENST00000577725 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
CRLF3-202ENST00000577725 SPRR2DP22532 72 aa4.22□□□□□ -1.73
CRLF3-202ENST00000577725 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
CRLF3-202ENST00000577725 MT1XP80297 61 aa4.18□□□□□ -1.74
CRLF3-202ENST00000577725 KRTAP10-5P60370 271 aa4.17□□□□□ -1.74
CRLF3-202ENST00000577725 KRTAP4-8Q9BYQ9 185 aa4.17□□□□□ -1.74
CRLF3-202ENST00000577725 DSTQ03001 7570 aaKnown RBP4.17□□□□□ -1.74
CRLF3-202ENST00000577725 LCE3BQ5TA77 95 aa4.16□□□□□ -1.74
CRLF3-202ENST00000577725 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
CRLF3-202ENST00000577725 ROMO1P60602 79 aa4.15□□□□□ -1.75
CRLF3-202ENST00000577725 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
CRLF3-202ENST00000577725 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
CRLF3-202ENST00000577725 LUZP6Q538Z0 58 aa4.06□□□□□ -1.76
CRLF3-202ENST00000577725 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
CRLF3-202ENST00000577725 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
CRLF3-202ENST00000577725 TNP1P09430 55 aa4□□□□□ -1.77
CRLF3-202ENST00000577725 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
CRLF3-202ENST00000577725 KRTAP8-1Q8IUC2 63 aa4□□□□□ -1.77
CRLF3-202ENST00000577725 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
CRLF3-202ENST00000577725 KRTAP5-10Q6L8G5 202 aa3.98□□□□□ -1.77
CRLF3-202ENST00000577725 HMCN1Q96RW7 5635 aa3.94□□□□□ -1.78
CRLF3-202ENST00000577725 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
CRLF3-202ENST00000577725 KRTAP5-7Q6L8G8 165 aa3.93□□□□□ -1.78
CRLF3-202ENST00000577725 MT3P25713 68 aa3.91□□□□□ -1.78
CRLF3-202ENST00000577725 LCE3AQ5TA76 89 aa3.91□□□□□ -1.78
CRLF3-202ENST00000577725 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
CRLF3-202ENST00000577725 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
CRLF3-202ENST00000577725 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
CRLF3-202ENST00000577725 PP632Q6XCG6 107 aa3.88□□□□□ -1.79
CRLF3-202ENST00000577725 KRTAP19-5Q3LI72 72 aa3.78□□□□□ -1.8
CRLF3-202ENST00000577725 MT4P47944 62 aa3.75□□□□□ -1.81
CRLF3-202ENST00000577725 KRTAP12-3P60328 96 aa3.72□□□□□ -1.81
CRLF3-202ENST00000577725 KRTAP19-7Q3SYF9 63 aa3.72□□□□□ -1.81
CRLF3-202ENST00000577725 KRTAP5-3Q6L8H2 238 aa3.71□□□□□ -1.82
CRLF3-202ENST00000577725 MT1EP04732 61 aa3.67□□□□□ -1.82
CRLF3-202ENST00000577725 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
CRLF3-202ENST00000577725 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
CRLF3-202ENST00000577725 MT1LQ93083 61 aa3.58□□□□□ -1.84
CRLF3-202ENST00000577725 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
CRLF3-202ENST00000577725 KRTAP19-3Q7Z4W3 81 aa3.52□□□□□ -1.85
CRLF3-202ENST00000577725 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
CRLF3-202ENST00000577725 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
CRLF3-202ENST00000577725 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
CRLF3-202ENST00000577725 MT1MQ8N339 61 aa3.47□□□□□ -1.85
CRLF3-202ENST00000577725 MT1GP13640 62 aa3.46□□□□□ -1.86
CRLF3-202ENST00000577725 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
CRLF3-202ENST00000577725 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
CRLF3-202ENST00000577725 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
CRLF3-202ENST00000577725 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
CRLF3-202ENST00000577725 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
CRLF3-202ENST00000577725 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
CRLF3-202ENST00000577725 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
CRLF3-202ENST00000577725 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
CRLF3-202ENST00000577725 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
CRLF3-202ENST00000577725 MT1AP04731 61 aa3.04□□□□□ -1.92
CRLF3-202ENST00000577725 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
CRLF3-202ENST00000577725 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
CRLF3-202ENST00000577725 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
CRLF3-202ENST00000577725 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
CRLF3-202ENST00000577725 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
CRLF3-202ENST00000577725 INE1O15225 51 aa2.84□□□□□ -1.95
CRLF3-202ENST00000577725 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
CRLF3-202ENST00000577725 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
CRLF3-202ENST00000577725 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
CRLF3-202ENST00000577725 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
CRLF3-202ENST00000577725 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
CRLF3-202ENST00000577725 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
CRLF3-202ENST00000577725 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
CRLF3-202ENST00000577725 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
CRLF3-202ENST00000577725 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
CRLF3-202ENST00000577725 PRM1P04553 51 aa2.17□□□□□ -2.06
CRLF3-202ENST00000577725 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
CRLF3-202ENST00000577725 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
CRLF3-202ENST00000577725 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
CRLF3-202ENST00000577725 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
CRLF3-202ENST00000577725 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 73.2 ms