RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 LPAP08519 4548 aa0.22□□□□□ -2.37
COPS3-213ENST00000577210 LOC400499M0QZD8 3231 aa0.22□□□□□ -2.37
COPS3-213ENST00000577210 CSMD2Q7Z408 3487 aa0.22□□□□□ -2.37
COPS3-213ENST00000577210 C9orf92A6NGG3 77 aa0.22□□□□□ -2.37
COPS3-213ENST00000577210 SPEGQ15772 3267 aa0.22□□□□□ -2.37
COPS3-213ENST00000577210 LYSTQ99698 3801 aa0.21□□□□□ -2.38
COPS3-213ENST00000577210 HECTD4Q9Y4D8 3996 aa0.21□□□□□ -2.38
COPS3-213ENST00000577210 DNAH3Q8TD57 4116 aa0.21□□□□□ -2.38
COPS3-213ENST00000577210 SMR3BP02814 79 aaPredicted RBP0.21□□□□□ -2.38
COPS3-213ENST00000577210 HSPG2P98160 4391 aa0.21□□□□□ -2.38
COPS3-213ENST00000577210 PKD1P98161 4303 aa0.21□□□□□ -2.38
COPS3-213ENST00000577210 BSNQ9UPA5 3926 aa0.21□□□□□ -2.38
COPS3-213ENST00000577210 HERC2O95714 4834 aa0.21□□□□□ -2.38
COPS3-213ENST00000577210 DNAH6Q9C0G6 4158 aa0.2□□□□□ -2.38
COPS3-213ENST00000577210 HRNRQ86YZ3 2850 aaPredicted RBP0.2□□□□□ -2.38
COPS3-213ENST00000577210 PKHD1L1Q86WI1 4243 aa0.2□□□□□ -2.38
COPS3-213ENST00000577210 HERC1Q15751 4861 aa0.2□□□□□ -2.38
COPS3-213ENST00000577210 KRTAP19-2Q3LHN2 52 aa0.2□□□□□ -2.38
COPS3-213ENST00000577210 KRTAP19-5Q3LI72 72 aa0.2□□□□□ -2.38
COPS3-213ENST00000577210 KMT2AQ03164 3969 aa0.2□□□□□ -2.38
COPS3-213ENST00000577210 PRKDCP78527 4128 aaKnown RBP0.2□□□□□ -2.38
COPS3-213ENST00000577210 EYSQ5T1H1 3165 aa0.2□□□□□ -2.38
COPS3-213ENST00000577210 DNAH7Q8WXX0 4024 aa0.2□□□□□ -2.38
COPS3-213ENST00000577210 PKHD1P08F94 4074 aa0.19□□□□□ -2.38
COPS3-213ENST00000577210 FAT4Q6V0I7 4981 aa0.19□□□□□ -2.38
COPS3-213ENST00000577210 MUC3AQ02505 3323 aa0.19□□□□□ -2.38
COPS3-213ENST00000577210 FLGP20930 4061 aaPredicted RBP0.19□□□□□ -2.38
COPS3-213ENST00000577210 TNXBP22105 4242 aa0.19□□□□□ -2.38
COPS3-213ENST00000577210 VPS13BQ7Z7G8 4022 aa0.19□□□□□ -2.38
COPS3-213ENST00000577210 STARD9Q9P2P6 4700 aa0.18□□□□□ -2.38
COPS3-213ENST00000577210 M0R2T5 61 aa0.18□□□□□ -2.38
COPS3-213ENST00000577210 PRM1P04553 51 aa0.18□□□□□ -2.38
COPS3-213ENST00000577210 MT1AP04731 61 aa0.18□□□□□ -2.38
COPS3-213ENST00000577210 SPRR2GQ9BYE4 73 aa0.18□□□□□ -2.38
COPS3-213ENST00000577210 HYDINQ4G0P3 5121 aa0.18□□□□□ -2.38
COPS3-213ENST00000577210 KMT2CQ8NEZ4 4911 aaKnown RBP0.18□□□□□ -2.38
COPS3-213ENST00000577210 LRP2P98164 4655 aa0.18□□□□□ -2.38
COPS3-213ENST00000577210 DNHD1Q96M86 4753 aa0.17□□□□□ -2.38
COPS3-213ENST00000577210 EPPK1P58107 5090 aaKnown RBP0.17□□□□□ -2.38
COPS3-213ENST00000577210 RNF213Q63HN8 5207 aa0.17□□□□□ -2.38
COPS3-213ENST00000577210 BIRC6Q9NR09 4857 aa0.17□□□□□ -2.38
COPS3-213ENST00000577210 RYR1P21817 5038 aa0.17□□□□□ -2.38
COPS3-213ENST00000577210 MT1EP04732 61 aa0.17□□□□□ -2.38
COPS3-213ENST00000577210 MT1XP80297 61 aa0.17□□□□□ -2.38
COPS3-213ENST00000577210 RYR3Q15413 4870 aa0.17□□□□□ -2.38
COPS3-213ENST00000577210 KRTAP19-8Q3LI54 63 aa0.17□□□□□ -2.38
COPS3-213ENST00000577210 MT1LQ93083 61 aa0.17□□□□□ -2.38
COPS3-213ENST00000577210 USH2AO75445 5202 aa0.17□□□□□ -2.38
COPS3-213ENST00000577210 HMCN2Q8NDA2 5059 aa0.17□□□□□ -2.38
COPS3-213ENST00000577210 UBR4Q5T4S7 5183 aa0.16□□□□□ -2.38
COPS3-213ENST00000577210 MT1BP07438 61 aa0.16□□□□□ -2.38
COPS3-213ENST00000577210 MT1HL1P0DM35 61 aa0.16□□□□□ -2.38
COPS3-213ENST00000577210 KRTAP6-2Q3LI66 62 aa0.16□□□□□ -2.38
COPS3-213ENST00000577210 KRTAP19-7Q3SYF9 63 aa0.16□□□□□ -2.38
COPS3-213ENST00000577210 RYR2Q92736 4967 aa0.16□□□□□ -2.38
COPS3-213ENST00000577210 PCLOQ9Y6V0 5065 aa0.16□□□□□ -2.38
COPS3-213ENST00000577210 MT1HP80294 61 aa0.15□□□□□ -2.39
COPS3-213ENST00000577210 ABCA13Q86UQ4 5058 aa0.15□□□□□ -2.39
COPS3-213ENST00000577210 MUC2Q02817 5179 aa0.15□□□□□ -2.39
COPS3-213ENST00000577210 KIAA1109Q2LD37 5005 aa0.14□□□□□ -2.39
COPS3-213ENST00000577210 MT2AP02795 61 aa0.14□□□□□ -2.39
COPS3-213ENST00000577210 MT1FP04733 61 aa0.14□□□□□ -2.39
COPS3-213ENST00000577210 MT1GP13640 62 aa0.14□□□□□ -2.39
COPS3-213ENST00000577210 SPRR2FQ96RM1 72 aa0.14□□□□□ -2.39
COPS3-213ENST00000577210 MUC12Q9UKN1 5478 aa0.13□□□□□ -2.39
COPS3-213ENST00000577210 SPRR2DP22532 72 aa0.13□□□□□ -2.39
COPS3-213ENST00000577210 SPRR2BP35325 72 aa0.13□□□□□ -2.39
COPS3-213ENST00000577210 SPRR2AP35326 72 aa0.13□□□□□ -2.39
COPS3-213ENST00000577210 KRTAP6-1Q3LI64 71 aa0.13□□□□□ -2.39
COPS3-213ENST00000577210 MT1MQ8N339 61 aa0.13□□□□□ -2.39
COPS3-213ENST00000577210 SSPOA2VEC9 5147 aa0.12□□□□□ -2.39
COPS3-213ENST00000577210 SPRR2EP22531 72 aa0.12□□□□□ -2.39
COPS3-213ENST00000577210 DSTQ03001 7570 aaKnown RBP0.12□□□□□ -2.39
COPS3-213ENST00000577210 KRTAP19-6Q3LI70 58 aa0.08□□□□□ -2.4
COPS3-213ENST00000577210 NEBP20929 6669 aa0.07□□□□□ -2.4
COPS3-213ENST00000577210 MT4P47944 62 aa0.05□□□□□ -2.4
COPS3-213ENST00000577210 KRTAP20-2Q3LI61 65 aa0.05□□□□□ -2.4
COPS3-213ENST00000577210 KRTAP20-1Q3LI63 56 aa0.03□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 71.4 ms