RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 KRTAP4-8A0A0G2JLE6 195 aa3.35□□□□□ -1.87
PRPF8-213ENST00000576407 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
PRPF8-213ENST00000576407 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
PRPF8-213ENST00000576407 KRTAP4-8Q9BYQ9 185 aa3.35□□□□□ -1.87
PRPF8-213ENST00000576407 NEBP20929 6669 aa3.32□□□□□ -1.88
PRPF8-213ENST00000576407 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
PRPF8-213ENST00000576407 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
PRPF8-213ENST00000576407 MUC12Q9UKN1 5478 aa3.27□□□□□ -1.89
PRPF8-213ENST00000576407 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
PRPF8-213ENST00000576407 SPRR2FQ96RM1 72 aa3.24□□□□□ -1.89
PRPF8-213ENST00000576407 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
PRPF8-213ENST00000576407 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
PRPF8-213ENST00000576407 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
PRPF8-213ENST00000576407 KRTAP19-7Q3SYF9 63 aa3.19□□□□□ -1.9
PRPF8-213ENST00000576407 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
PRPF8-213ENST00000576407 KRTAP19-5Q3LI72 72 aa3.18□□□□□ -1.9
PRPF8-213ENST00000576407 LCE5AQ5TCM9 118 aa3.18□□□□□ -1.9
PRPF8-213ENST00000576407 SPRR2EP22531 72 aa3.17□□□□□ -1.9
PRPF8-213ENST00000576407 SPRR2BP35325 72 aa3.17□□□□□ -1.9
PRPF8-213ENST00000576407 SPRR2AP35326 72 aa3.17□□□□□ -1.9
PRPF8-213ENST00000576407 LCE3BQ5TA77 95 aa3.17□□□□□ -1.9
PRPF8-213ENST00000576407 MT1EP04732 61 aa3.14□□□□□ -1.91
PRPF8-213ENST00000576407 LCE1AQ5T7P2 110 aa3.13□□□□□ -1.91
PRPF8-213ENST00000576407 KRTAP12-3P60328 96 aa3.11□□□□□ -1.91
PRPF8-213ENST00000576407 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
PRPF8-213ENST00000576407 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
PRPF8-213ENST00000576407 SPRR2DP22532 72 aa3.07□□□□□ -1.92
PRPF8-213ENST00000576407 KRTAP19-3Q7Z4W3 81 aa3.06□□□□□ -1.92
PRPF8-213ENST00000576407 MT1LQ93083 61 aa3.05□□□□□ -1.92
PRPF8-213ENST00000576407 MT1GP13640 62 aa3.02□□□□□ -1.93
PRPF8-213ENST00000576407 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
PRPF8-213ENST00000576407 MT1MQ8N339 61 aa2.98□□□□□ -1.93
PRPF8-213ENST00000576407 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
PRPF8-213ENST00000576407 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
PRPF8-213ENST00000576407 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
PRPF8-213ENST00000576407 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
PRPF8-213ENST00000576407 MT3P25713 68 aa2.85□□□□□ -1.95
PRPF8-213ENST00000576407 KRTAP4-9Q9BYQ8 210 aa2.84□□□□□ -1.95
PRPF8-213ENST00000576407 KRTAP4-11Q9BYQ6 195 aa2.81□□□□□ -1.96
PRPF8-213ENST00000576407 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
PRPF8-213ENST00000576407 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
PRPF8-213ENST00000576407 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.98
PRPF8-213ENST00000576407 MT4P47944 62 aa2.7□□□□□ -1.98
PRPF8-213ENST00000576407 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
PRPF8-213ENST00000576407 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
PRPF8-213ENST00000576407 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
PRPF8-213ENST00000576407 MT1AP04731 61 aa2.6□□□□□ -1.99
PRPF8-213ENST00000576407 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
PRPF8-213ENST00000576407 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
PRPF8-213ENST00000576407 SYNE1Q8NF91 8797 aaKnown RBP2.57□□□□□ -2
PRPF8-213ENST00000576407 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
PRPF8-213ENST00000576407 KRTAP12-4P60329 112 aa2.56□□□□□ -2
PRPF8-213ENST00000576407 AHNAK2Q8IVF2 5795 aa2.56□□□□□ -2
PRPF8-213ENST00000576407 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
PRPF8-213ENST00000576407 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
PRPF8-213ENST00000576407 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
PRPF8-213ENST00000576407 KRTAP6-2Q3LI66 62 aa2.41□□□□□ -2.02
PRPF8-213ENST00000576407 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
PRPF8-213ENST00000576407 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
PRPF8-213ENST00000576407 LCE3EQ5T5B0 92 aa2.21□□□□□ -2.06
PRPF8-213ENST00000576407 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
PRPF8-213ENST00000576407 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
PRPF8-213ENST00000576407 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
PRPF8-213ENST00000576407 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
PRPF8-213ENST00000576407 PRM1P04553 51 aa2.14□□□□□ -2.07
PRPF8-213ENST00000576407 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
PRPF8-213ENST00000576407 LCE1EQ5T753 118 aa2.13□□□□□ -2.07
PRPF8-213ENST00000576407 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
PRPF8-213ENST00000576407 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
PRPF8-213ENST00000576407 LCE1CQ5T751 118 aa1.96□□□□□ -2.1
PRPF8-213ENST00000576407 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
PRPF8-213ENST00000576407 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
PRPF8-213ENST00000576407 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
PRPF8-213ENST00000576407 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
PRPF8-213ENST00000576407 KRTAP4-4Q9BYR3 166 aa1.51□□□□□ -2.17
PRPF8-213ENST00000576407 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
PRPF8-213ENST00000576407 MUC19Q7Z5P9 8384 aa1.34□□□□□ -2.19
PRPF8-213ENST00000576407 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms