RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 NEBP20929 6669 aa5.29□□□□□ -1.56
RPAIN-217ENST00000575711 KRTAP25-1Q3LHN0 102 aa5.26□□□□□ -1.57
RPAIN-217ENST00000575711 SPRR2EP22531 72 aa5.25□□□□□ -1.57
RPAIN-217ENST00000575711 SPRR2BP35325 72 aa5.25□□□□□ -1.57
RPAIN-217ENST00000575711 SPRR2AP35326 72 aa5.25□□□□□ -1.57
RPAIN-217ENST00000575711 LCE3AQ5TA76 89 aa5.24□□□□□ -1.57
RPAIN-217ENST00000575711 MDN1Q9NU22 5596 aa5.23□□□□□ -1.57
RPAIN-217ENST00000575711 KRTAP19-7Q3SYF9 63 aa5.22□□□□□ -1.57
RPAIN-217ENST00000575711 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.58
RPAIN-217ENST00000575711 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
RPAIN-217ENST00000575711 ROMO1P60602 79 aa5.19□□□□□ -1.58
RPAIN-217ENST00000575711 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
RPAIN-217ENST00000575711 BRK1Q8WUW1 75 aa5.18□□□□□ -1.58
RPAIN-217ENST00000575711 MT1EP04732 61 aa5.17□□□□□ -1.58
RPAIN-217ENST00000575711 SPRR2DP22532 72 aa5.07□□□□□ -1.6
RPAIN-217ENST00000575711 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
RPAIN-217ENST00000575711 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
RPAIN-217ENST00000575711 KRTAP20-1Q3LI63 56 aa5.04□□□□□ -1.6
RPAIN-217ENST00000575711 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
RPAIN-217ENST00000575711 MT1GP13640 62 aa4.99□□□□□ -1.61
RPAIN-217ENST00000575711 PP632Q6XCG6 107 aa4.99□□□□□ -1.61
RPAIN-217ENST00000575711 MT1LQ93083 61 aa4.99□□□□□ -1.61
RPAIN-217ENST00000575711 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
RPAIN-217ENST00000575711 MT1MQ8N339 61 aa4.9□□□□□ -1.63
RPAIN-217ENST00000575711 PMAIP1Q13794 54 aa4.88□□□□□ -1.63
RPAIN-217ENST00000575711 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
RPAIN-217ENST00000575711 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
RPAIN-217ENST00000575711 KRTAP2-1Q9BYU5 128 aa4.85□□□□□ -1.63
RPAIN-217ENST00000575711 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.82□□□□□ -1.64
RPAIN-217ENST00000575711 PRO0628Q9UI54 55 aa4.81□□□□□ -1.64
RPAIN-217ENST00000575711 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
RPAIN-217ENST00000575711 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
RPAIN-217ENST00000575711 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
RPAIN-217ENST00000575711 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
RPAIN-217ENST00000575711 KRTAP5-11Q6L8G4 156 aa4.65□□□□□ -1.67
RPAIN-217ENST00000575711 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
RPAIN-217ENST00000575711 KTN1-AS1Q86SY8 53 aa4.53□□□□□ -1.68
RPAIN-217ENST00000575711 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.7
RPAIN-217ENST00000575711 KRTAP5-5Q701N2 237 aaPredicted RBP4.44□□□□□ -1.7
RPAIN-217ENST00000575711 MT4P47944 62 aa4.41□□□□□ -1.7
RPAIN-217ENST00000575711 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
RPAIN-217ENST00000575711 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
RPAIN-217ENST00000575711 HMCN1Q96RW7 5635 aa4.28□□□□□ -1.72
RPAIN-217ENST00000575711 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
RPAIN-217ENST00000575711 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
RPAIN-217ENST00000575711 MT1AP04731 61 aa4.26□□□□□ -1.73
RPAIN-217ENST00000575711 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
RPAIN-217ENST00000575711 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
RPAIN-217ENST00000575711 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
RPAIN-217ENST00000575711 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
RPAIN-217ENST00000575711 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
RPAIN-217ENST00000575711 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
RPAIN-217ENST00000575711 KRTAP4-4Q9BYR3 166 aa4.03□□□□□ -1.76
RPAIN-217ENST00000575711 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
RPAIN-217ENST00000575711 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
RPAIN-217ENST00000575711 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
RPAIN-217ENST00000575711 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.79
RPAIN-217ENST00000575711 MT3P25713 68 aa3.89□□□□□ -1.79
RPAIN-217ENST00000575711 LUZP6Q538Z0 58 aa3.88□□□□□ -1.79
RPAIN-217ENST00000575711 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
RPAIN-217ENST00000575711 KRTAP5-7Q6L8G8 165 aa3.71□□□□□ -1.82
RPAIN-217ENST00000575711 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
RPAIN-217ENST00000575711 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
RPAIN-217ENST00000575711 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
RPAIN-217ENST00000575711 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
RPAIN-217ENST00000575711 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
RPAIN-217ENST00000575711 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
RPAIN-217ENST00000575711 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
RPAIN-217ENST00000575711 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
RPAIN-217ENST00000575711 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
RPAIN-217ENST00000575711 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
RPAIN-217ENST00000575711 INE1O15225 51 aa2.82□□□□□ -1.96
RPAIN-217ENST00000575711 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
RPAIN-217ENST00000575711 PRM1P04553 51 aa2.68□□□□□ -1.98
RPAIN-217ENST00000575711 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
RPAIN-217ENST00000575711 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
RPAIN-217ENST00000575711 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
RPAIN-217ENST00000575711 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 43.4 ms