RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
RPAIN-216ENST00000575599 KMT2DO14686 5537 aa5.42□□□□□ -1.54
RPAIN-216ENST00000575599 NEBP20929 6669 aa5.42□□□□□ -1.54
RPAIN-216ENST00000575599 KRTAP5-9P26371 169 aa5.42□□□□□ -1.54
RPAIN-216ENST00000575599 KRTAP8-1Q8IUC2 63 aa5.34□□□□□ -1.55
RPAIN-216ENST00000575599 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
RPAIN-216ENST00000575599 SPRR2FQ96RM1 72 aa5.33□□□□□ -1.56
RPAIN-216ENST00000575599 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
RPAIN-216ENST00000575599 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
RPAIN-216ENST00000575599 KRTAP5-1Q6L8H4 278 aa5.29□□□□□ -1.56
RPAIN-216ENST00000575599 PMAIP1Q13794 54 aa5.28□□□□□ -1.56
RPAIN-216ENST00000575599 KRTAP10-12P60413 245 aa5.27□□□□□ -1.57
RPAIN-216ENST00000575599 MDN1Q9NU22 5596 aa5.26□□□□□ -1.57
RPAIN-216ENST00000575599 SPRR2EP22531 72 aa5.23□□□□□ -1.57
RPAIN-216ENST00000575599 SPRR2BP35325 72 aa5.23□□□□□ -1.57
RPAIN-216ENST00000575599 SPRR2AP35326 72 aa5.23□□□□□ -1.57
RPAIN-216ENST00000575599 KRTAP5-4Q6L8H1 288 aa5.2□□□□□ -1.58
RPAIN-216ENST00000575599 PRAC1Q96KF2 57 aa5.2□□□□□ -1.58
RPAIN-216ENST00000575599 ROMO1P60602 79 aa5.18□□□□□ -1.58
RPAIN-216ENST00000575599 C10orf95Q9H7T3 257 aa5.18□□□□□ -1.58
RPAIN-216ENST00000575599 TNP1P09430 55 aa5.15□□□□□ -1.59
RPAIN-216ENST00000575599 KTN1-AS1Q86SY8 53 aa5.14□□□□□ -1.59
RPAIN-216ENST00000575599 KRTAP4-4Q9BYR3 166 aa5.12□□□□□ -1.59
RPAIN-216ENST00000575599 KRTAP2-2Q9BYT5 123 aa5.09□□□□□ -1.59
RPAIN-216ENST00000575599 KRTAP25-1Q3LHN0 102 aa5.08□□□□□ -1.6
RPAIN-216ENST00000575599 KRTAP2-3P0C7H8 128 aa5.06□□□□□ -1.6
RPAIN-216ENST00000575599 KRTAP2-4Q9BYR9 128 aa5.06□□□□□ -1.6
RPAIN-216ENST00000575599 SPRR2DP22532 72 aa5.05□□□□□ -1.6
RPAIN-216ENST00000575599 GPR98Q8WXG9 6306 aa4.98□□□□□ -1.61
RPAIN-216ENST00000575599 KRTAP19-7Q3SYF9 63 aa4.96□□□□□ -1.62
RPAIN-216ENST00000575599 MT1EP04732 61 aa4.92□□□□□ -1.62
RPAIN-216ENST00000575599 KRTAP2-1Q9BYU5 128 aa4.91□□□□□ -1.62
RPAIN-216ENST00000575599 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
RPAIN-216ENST00000575599 KRTAP19-5Q3LI72 72 aa4.89□□□□□ -1.63
RPAIN-216ENST00000575599 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
RPAIN-216ENST00000575599 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
RPAIN-216ENST00000575599 NDUFAF8A1L188 74 aa4.85□□□□□ -1.63
RPAIN-216ENST00000575599 MT3P25713 68 aa4.79□□□□□ -1.64
RPAIN-216ENST00000575599 MT1GP13640 62 aa4.74□□□□□ -1.65
RPAIN-216ENST00000575599 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
RPAIN-216ENST00000575599 MT1LQ93083 61 aa4.72□□□□□ -1.65
RPAIN-216ENST00000575599 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
RPAIN-216ENST00000575599 MT1MQ8N339 61 aa4.68□□□□□ -1.66
RPAIN-216ENST00000575599 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
RPAIN-216ENST00000575599 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
RPAIN-216ENST00000575599 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
RPAIN-216ENST00000575599 MT4P47944 62 aa4.42□□□□□ -1.7
RPAIN-216ENST00000575599 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.71
RPAIN-216ENST00000575599 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
RPAIN-216ENST00000575599 LCE1FQ5T754 118 aa4.38□□□□□ -1.71
RPAIN-216ENST00000575599 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
RPAIN-216ENST00000575599 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
RPAIN-216ENST00000575599 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
RPAIN-216ENST00000575599 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
RPAIN-216ENST00000575599 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
RPAIN-216ENST00000575599 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.74
RPAIN-216ENST00000575599 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
RPAIN-216ENST00000575599 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
RPAIN-216ENST00000575599 KRTAP20-2Q3LI61 65 aa4.14□□□□□ -1.75
RPAIN-216ENST00000575599 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
RPAIN-216ENST00000575599 MT1AP04731 61 aa4.02□□□□□ -1.77
RPAIN-216ENST00000575599 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
RPAIN-216ENST00000575599 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
RPAIN-216ENST00000575599 KRTAP5-8O75690 187 aa3.78□□□□□ -1.8
RPAIN-216ENST00000575599 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
RPAIN-216ENST00000575599 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
RPAIN-216ENST00000575599 MUC5ACP98088 5654 aa3.65□□□□□ -1.83
RPAIN-216ENST00000575599 MUC5BQ9HC84 5762 aaPredicted RBP3.63□□□□□ -1.83
RPAIN-216ENST00000575599 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
RPAIN-216ENST00000575599 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
RPAIN-216ENST00000575599 INE1O15225 51 aa3.38□□□□□ -1.87
RPAIN-216ENST00000575599 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
RPAIN-216ENST00000575599 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
RPAIN-216ENST00000575599 PRM1P04553 51 aa2.67□□□□□ -1.98
RPAIN-216ENST00000575599 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
RPAIN-216ENST00000575599 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
RPAIN-216ENST00000575599 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
RPAIN-216ENST00000575599 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 201.5 ms