RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 KRTAP19-5Q3LI72 72 aa3.19□□□□□ -1.9
SMG6-216ENST00000575176 LCE3BQ5TA77 95 aa3.19□□□□□ -1.9
SMG6-216ENST00000575176 KRTAP19-3Q7Z4W3 81 aa3.19□□□□□ -1.9
SMG6-216ENST00000575176 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
SMG6-216ENST00000575176 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
SMG6-216ENST00000575176 PRAC1Q96KF2 57 aa3.14□□□□□ -1.91
SMG6-216ENST00000575176 MIR22HGQ0VDD5 57 aa3.12□□□□□ -1.91
SMG6-216ENST00000575176 MT1LQ93083 61 aa3.12□□□□□ -1.91
SMG6-216ENST00000575176 UQCR11O14957 56 aa3.11□□□□□ -1.91
SMG6-216ENST00000575176 MT1MQ8N339 61 aa3.1□□□□□ -1.91
SMG6-216ENST00000575176 MT1GP13640 62 aa3.08□□□□□ -1.92
SMG6-216ENST00000575176 H3BS24 57 aa3.05□□□□□ -1.92
SMG6-216ENST00000575176 TNP1P09430 55 aa3.05□□□□□ -1.92
SMG6-216ENST00000575176 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
SMG6-216ENST00000575176 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
SMG6-216ENST00000575176 KRTAP25-1Q3LHN0 102 aa3□□□□□ -1.93
SMG6-216ENST00000575176 KRTAP4-7Q9BYR0 210 aa2.99□□□□□ -1.93
SMG6-216ENST00000575176 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
SMG6-216ENST00000575176 PP632Q6XCG6 107 aa2.98□□□□□ -1.93
SMG6-216ENST00000575176 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
SMG6-216ENST00000575176 KRTAP4-9Q9BYQ8 210 aa2.97□□□□□ -1.93
SMG6-216ENST00000575176 ROMO1P60602 79 aa2.96□□□□□ -1.94
SMG6-216ENST00000575176 LCE1DQ5T752 114 aa2.94□□□□□ -1.94
SMG6-216ENST00000575176 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
SMG6-216ENST00000575176 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
SMG6-216ENST00000575176 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
SMG6-216ENST00000575176 K7ERS5 55 aa2.88□□□□□ -1.95
SMG6-216ENST00000575176 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
SMG6-216ENST00000575176 KRTAP23-1A1A580 65 aa2.86□□□□□ -1.95
SMG6-216ENST00000575176 MT4P47944 62 aa2.85□□□□□ -1.95
SMG6-216ENST00000575176 KRTAP4-6Q9BYQ5 205 aa2.85□□□□□ -1.95
SMG6-216ENST00000575176 LOC100996750A0A140TA64 210 aa2.82□□□□□ -1.96
SMG6-216ENST00000575176 KRTAP15-1Q3LI76 137 aa2.8□□□□□ -1.96
SMG6-216ENST00000575176 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
SMG6-216ENST00000575176 KRTAP19-4Q3LI73 84 aa2.77□□□□□ -1.97
SMG6-216ENST00000575176 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
SMG6-216ENST00000575176 LCE3CQ5T5A8 94 aa2.76□□□□□ -1.97
SMG6-216ENST00000575176 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
SMG6-216ENST00000575176 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
SMG6-216ENST00000575176 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
SMG6-216ENST00000575176 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
SMG6-216ENST00000575176 NDUFAF8A1L188 74 aa2.71□□□□□ -1.98
SMG6-216ENST00000575176 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.99
SMG6-216ENST00000575176 MT1AP04731 61 aa2.64□□□□□ -1.99
SMG6-216ENST00000575176 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
SMG6-216ENST00000575176 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
SMG6-216ENST00000575176 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
SMG6-216ENST00000575176 A0A0A0MQY5 61 aa2.58□□□□□ -2
SMG6-216ENST00000575176 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
SMG6-216ENST00000575176 KRTAP9-4Q9BYQ2 154 aa2.52□□□□□ -2.01
SMG6-216ENST00000575176 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
SMG6-216ENST00000575176 KRTAP4-11Q9BYQ6 195 aa2.48□□□□□ -2.01
SMG6-216ENST00000575176 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
SMG6-216ENST00000575176 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
SMG6-216ENST00000575176 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
SMG6-216ENST00000575176 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
SMG6-216ENST00000575176 MT3P25713 68 aa2.34□□□□□ -2.03
SMG6-216ENST00000575176 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
SMG6-216ENST00000575176 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
SMG6-216ENST00000575176 INE1O15225 51 aa2.28□□□□□ -2.04
SMG6-216ENST00000575176 LCE1EQ5T753 118 aa2.19□□□□□ -2.06
SMG6-216ENST00000575176 KRTAP9-9Q9BYP9 154 aa2.18□□□□□ -2.06
SMG6-216ENST00000575176 KRTAP4-2Q9BYR5 136 aa2.14□□□□□ -2.07
SMG6-216ENST00000575176 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
SMG6-216ENST00000575176 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
SMG6-216ENST00000575176 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
SMG6-216ENST00000575176 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
SMG6-216ENST00000575176 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
SMG6-216ENST00000575176 LCE3EQ5T5B0 92 aa1.84□□□□□ -2.11
SMG6-216ENST00000575176 KRTAP4-12Q9BQ66 201 aa1.83□□□□□ -2.12
SMG6-216ENST00000575176 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
SMG6-216ENST00000575176 LCE1FQ5T754 118 aa1.76□□□□□ -2.13
SMG6-216ENST00000575176 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
SMG6-216ENST00000575176 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
SMG6-216ENST00000575176 PRM1P04553 51 aa1.5□□□□□ -2.17
SMG6-216ENST00000575176 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
SMG6-216ENST00000575176 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
SMG6-216ENST00000575176 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 103.5 ms