RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 LCE5AQ5TCM9 118 aa5.86□□□□□ -1.47
PFN1-203ENST00000574872 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
PFN1-203ENST00000574872 BRK1Q8WUW1 75 aa5.81□□□□□ -1.48
PFN1-203ENST00000574872 MT1LQ93083 61 aa5.81□□□□□ -1.48
PFN1-203ENST00000574872 MT1GP13640 62 aa5.77□□□□□ -1.49
PFN1-203ENST00000574872 LCE3BQ5TA77 95 aa5.77□□□□□ -1.49
PFN1-203ENST00000574872 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
PFN1-203ENST00000574872 H3BS24 57 aa5.73□□□□□ -1.49
PFN1-203ENST00000574872 PP632Q6XCG6 107 aa5.73□□□□□ -1.49
PFN1-203ENST00000574872 MT1MQ8N339 61 aa5.72□□□□□ -1.49
PFN1-203ENST00000574872 KRTAP2-2Q9BYT5 123 aa5.7□□□□□ -1.5
PFN1-203ENST00000574872 KRTAP2-1Q9BYU5 128 aa5.7□□□□□ -1.5
PFN1-203ENST00000574872 GPR98Q8WXG9 6306 aa5.67□□□□□ -1.5
PFN1-203ENST00000574872 KRTAP4-3Q9BYR4 195 aa5.6□□□□□ -1.51
PFN1-203ENST00000574872 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.51
PFN1-203ENST00000574872 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
PFN1-203ENST00000574872 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.51
PFN1-203ENST00000574872 DSTQ03001 7570 aaKnown RBP5.58□□□□□ -1.52
PFN1-203ENST00000574872 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
PFN1-203ENST00000574872 PMAIP1Q13794 54 aa5.45□□□□□ -1.54
PFN1-203ENST00000574872 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
PFN1-203ENST00000574872 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
PFN1-203ENST00000574872 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
PFN1-203ENST00000574872 PRO0628Q9UI54 55 aa5.31□□□□□ -1.56
PFN1-203ENST00000574872 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
PFN1-203ENST00000574872 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
PFN1-203ENST00000574872 MT4P47944 62 aa5.22□□□□□ -1.57
PFN1-203ENST00000574872 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
PFN1-203ENST00000574872 LCE1DQ5T752 114 aa5.2□□□□□ -1.58
PFN1-203ENST00000574872 KRTAP5-5Q701N2 237 aaPredicted RBP5.18□□□□□ -1.58
PFN1-203ENST00000574872 KRTAP4-12Q9BQ66 201 aa5.18□□□□□ -1.58
PFN1-203ENST00000574872 HMCN1Q96RW7 5635 aa5.14□□□□□ -1.59
PFN1-203ENST00000574872 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
PFN1-203ENST00000574872 KTN1-AS1Q86SY8 53 aa5.02□□□□□ -1.61
PFN1-203ENST00000574872 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
PFN1-203ENST00000574872 KRTAP12-4P60329 112 aa4.97□□□□□ -1.61
PFN1-203ENST00000574872 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
PFN1-203ENST00000574872 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
PFN1-203ENST00000574872 MT1AP04731 61 aa4.94□□□□□ -1.62
PFN1-203ENST00000574872 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
PFN1-203ENST00000574872 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
PFN1-203ENST00000574872 AHNAK2Q8IVF2 5795 aa4.9□□□□□ -1.62
PFN1-203ENST00000574872 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.63
PFN1-203ENST00000574872 SVIPQ8NHG7 77 aa4.83□□□□□ -1.64
PFN1-203ENST00000574872 KRTAP5-10Q6L8G5 202 aa4.8□□□□□ -1.64
PFN1-203ENST00000574872 KRTAP5-3Q6L8H2 238 aa4.75□□□□□ -1.65
PFN1-203ENST00000574872 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
PFN1-203ENST00000574872 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
PFN1-203ENST00000574872 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
PFN1-203ENST00000574872 MT3P25713 68 aa4.5□□□□□ -1.69
PFN1-203ENST00000574872 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
PFN1-203ENST00000574872 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
PFN1-203ENST00000574872 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
PFN1-203ENST00000574872 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.72
PFN1-203ENST00000574872 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
PFN1-203ENST00000574872 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
PFN1-203ENST00000574872 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
PFN1-203ENST00000574872 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
PFN1-203ENST00000574872 MUC5BQ9HC84 5762 aaPredicted RBP4.09□□□□□ -1.76
PFN1-203ENST00000574872 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
PFN1-203ENST00000574872 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
PFN1-203ENST00000574872 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
PFN1-203ENST00000574872 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
PFN1-203ENST00000574872 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
PFN1-203ENST00000574872 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
PFN1-203ENST00000574872 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
PFN1-203ENST00000574872 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
PFN1-203ENST00000574872 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
PFN1-203ENST00000574872 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
PFN1-203ENST00000574872 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
PFN1-203ENST00000574872 INE1O15225 51 aa3.05□□□□□ -1.92
PFN1-203ENST00000574872 PRM1P04553 51 aa3.05□□□□□ -1.92
PFN1-203ENST00000574872 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
PFN1-203ENST00000574872 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
PFN1-203ENST00000574872 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
PFN1-203ENST00000574872 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
PFN1-203ENST00000574872 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 7.8 ms