RNA–Protein interactions for RNA: ENST00000574680.1

PKMYT1-215, Transcript of protein kinase, membrane associated tyrosine/threonine 1, human

TSL 2

Gene PKMYT1, Length 717 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKMYT1-215	ENST00000574680	KRTAP19-7	Q3SYF9	63 aa		4.69	□□□□□ -1.66
PKMYT1-215	ENST00000574680	SMIM26	A0A096LP01	95 aa		4.68	□□□□□ -1.66
PKMYT1-215	ENST00000574680	KRTAP2-1	Q9BYU5	128 aa		4.67	□□□□□ -1.66
PKMYT1-215	ENST00000574680	TMEM258	P61165	79 aa		4.65	□□□□□ -1.67
PKMYT1-215	ENST00000574680	MT1E	P04732	61 aa		4.64	□□□□□ -1.67
PKMYT1-215	ENST00000574680	PRR15L	Q9BU68	103 aa		4.62	□□□□□ -1.67
PKMYT1-215	ENST00000574680	LINC01558	Q9Y6Z2	57 aa		4.62	□□□□□ -1.67
PKMYT1-215	ENST00000574680	KRTAP19-3	Q7Z4W3	81 aa		4.58	□□□□□ -1.68
PKMYT1-215	ENST00000574680	KRTAP19-5	Q3LI72	72 aa		4.56	□□□□□ -1.68
PKMYT1-215	ENST00000574680	C10orf95	Q9H7T3	257 aa		4.56	□□□□□ -1.68
PKMYT1-215	ENST00000574680	LCE3A	Q5TA76	89 aa		4.5	□□□□□ -1.69
PKMYT1-215	ENST00000574680	UQCR11	O14957	56 aa		4.49	□□□□□ -1.69
PKMYT1-215	ENST00000574680	TNP1	P09430	55 aa		4.49	□□□□□ -1.69
PKMYT1-215	ENST00000574680	DST	Q03001	7570 aa	Known RBP	4.46	□□□□□ -1.7
PKMYT1-215	ENST00000574680	MT1G	P13640	62 aa		4.45	□□□□□ -1.7
PKMYT1-215	ENST00000574680	MT3	P25713	68 aa		4.44	□□□□□ -1.7
PKMYT1-215	ENST00000574680	MT1L	Q93083	61 aa		4.44	□□□□□ -1.7
PKMYT1-215	ENST00000574680	PP632	Q6XCG6	107 aa		4.41	□□□□□ -1.7
PKMYT1-215	ENST00000574680	MT1M	Q8N339	61 aa		4.41	□□□□□ -1.7
PKMYT1-215	ENST00000574680	MIR22HG	Q0VDD5	57 aa		4.4	□□□□□ -1.71
PKMYT1-215	ENST00000574680	KRTAP5-11	Q6L8G4	156 aa		4.39	□□□□□ -1.71
PKMYT1-215	ENST00000574680	PSPHP1	O15172	72 aa		4.35	□□□□□ -1.71
PKMYT1-215	ENST00000574680		Q1T7F1	81 aa		4.35	□□□□□ -1.71
PKMYT1-215	ENST00000574680		V9GYY9	64 aa		4.35	□□□□□ -1.71
PKMYT1-215	ENST00000574680	KRTAP12-3	P60328	96 aa		4.31	□□□□□ -1.72
PKMYT1-215	ENST00000574680	KRTAP4-3	Q9BYR4	195 aa		4.31	□□□□□ -1.72
PKMYT1-215	ENST00000574680	LCE1E	Q5T753	118 aa		4.29	□□□□□ -1.72
PKMYT1-215	ENST00000574680	KRTAP25-1	Q3LHN0	102 aa		4.28	□□□□□ -1.72
PKMYT1-215	ENST00000574680		K7ERS5	55 aa		4.26	□□□□□ -1.73
PKMYT1-215	ENST00000574680	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.25	□□□□□ -1.73
PKMYT1-215	ENST00000574680		A6NED7	52 aa		4.19	□□□□□ -1.74
PKMYT1-215	ENST00000574680	KRTAP5-4	Q6L8H1	288 aa		4.18	□□□□□ -1.74
PKMYT1-215	ENST00000574680	MT4	P47944	62 aa		4.16	□□□□□ -1.74
PKMYT1-215	ENST00000574680	RPS28	P62857	69 aa	Known RBP	4.14	□□□□□ -1.75
PKMYT1-215	ENST00000574680	LCE1F	Q5T754	118 aa		4.11	□□□□□ -1.75
PKMYT1-215	ENST00000574680	HMCN1	Q96RW7	5635 aa		4.1	□□□□□ -1.75
PKMYT1-215	ENST00000574680	CDC42SE1	Q9NRR8	79 aa		4.08	□□□□□ -1.76
PKMYT1-215	ENST00000574680	GPR98	Q8WXG9	6306 aa		4.08	□□□□□ -1.76
PKMYT1-215	ENST00000574680	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.06	□□□□□ -1.76
PKMYT1-215	ENST00000574680	ROMO1	P60602	79 aa		4.02	□□□□□ -1.77
PKMYT1-215	ENST00000574680	PRAC1	Q96KF2	57 aa		3.98	□□□□□ -1.77
PKMYT1-215	ENST00000574680	LCE3C	Q5T5A8	94 aa		3.97	□□□□□ -1.77
PKMYT1-215	ENST00000574680	KRTAP20-2	Q3LI61	65 aa		3.93	□□□□□ -1.78
PKMYT1-215	ENST00000574680	AHNAK2	Q8IVF2	5795 aa		3.93	□□□□□ -1.78
PKMYT1-215	ENST00000574680	SPRR5	A0A1B0GTR4	108 aa		3.9	□□□□□ -1.79
PKMYT1-215	ENST00000574680	KRTAP5-10	Q6L8G5	202 aa		3.89	□□□□□ -1.79
PKMYT1-215	ENST00000574680	SYNE1	Q8NF91	8797 aa	Known RBP	3.88	□□□□□ -1.79
PKMYT1-215	ENST00000574680	KRTAP12-4	P60329	112 aa		3.87	□□□□□ -1.79
PKMYT1-215	ENST00000574680	KRTAP9-6	A8MVA2	160 aa		3.86	□□□□□ -1.79
PKMYT1-215	ENST00000574680	NDUFAF8	A1L188	74 aa		3.84	□□□□□ -1.79
PKMYT1-215	ENST00000574680	MT1A	P04731	61 aa		3.77	□□□□□ -1.81
PKMYT1-215	ENST00000574680	KRTAP6-1	Q3LI64	71 aa		3.76	□□□□□ -1.81
PKMYT1-215	ENST00000574680	KRTAP5-1	Q6L8H4	278 aa		3.76	□□□□□ -1.81
PKMYT1-215	ENST00000574680	KRTAP5-7	Q6L8G8	165 aa		3.72	□□□□□ -1.81
PKMYT1-215	ENST00000574680	KRTAP5-2	Q701N4	177 aa		3.68	□□□□□ -1.82
PKMYT1-215	ENST00000574680	BRK1	Q8WUW1	75 aa		3.65	□□□□□ -1.83
PKMYT1-215	ENST00000574680	LCE3E	Q5T5B0	92 aa		3.58	□□□□□ -1.84
PKMYT1-215	ENST00000574680	KRTAP4-4	Q9BYR3	166 aa		3.58	□□□□□ -1.84
PKMYT1-215	ENST00000574680	KRTAP6-2	Q3LI66	62 aa		3.56	□□□□□ -1.84
PKMYT1-215	ENST00000574680	KRTAP5-8	O75690	187 aa		3.46	□□□□□ -1.86
PKMYT1-215	ENST00000574680	OBSCN	Q5VST9	7968 aa		3.44	□□□□□ -1.86
PKMYT1-215	ENST00000574680	PMAIP1	Q13794	54 aa		3.41	□□□□□ -1.86
PKMYT1-215	ENST00000574680	MUC5AC	P98088	5654 aa		3.23	□□□□□ -1.89
PKMYT1-215	ENST00000574680	PRO0628	Q9UI54	55 aa		3.19	□□□□□ -1.9
PKMYT1-215	ENST00000574680	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.19	□□□□□ -1.9
PKMYT1-215	ENST00000574680	AHNAK	Q09666	5890 aa	Known RBP	3.16	□□□□□ -1.9
PKMYT1-215	ENST00000574680	KTN1-AS1	Q86SY8	53 aa		3.07	□□□□□ -1.92
PKMYT1-215	ENST00000574680	LCE1B	Q5T7P3	118 aa		2.94	□□□□□ -1.94
PKMYT1-215	ENST00000574680	LCE1C	Q5T751	118 aa		2.92	□□□□□ -1.94
PKMYT1-215	ENST00000574680	LCE3D	Q9BYE3	92 aa		2.89	□□□□□ -1.95
PKMYT1-215	ENST00000574680	LUZP6	Q538Z0	58 aa		2.74	□□□□□ -1.97
PKMYT1-215	ENST00000574680	KRTAP21-2	Q3LI59	83 aa		2.48	□□□□□ -2.01
PKMYT1-215	ENST00000574680	MUC19	Q7Z5P9	8384 aa		2.34	□□□□□ -2.03
PKMYT1-215	ENST00000574680	PHGR1	C9JFL3	82 aa		2.29	□□□□□ -2.04
PKMYT1-215	ENST00000574680	PRM1	P04553	51 aa		2.07	□□□□□ -2.08
PKMYT1-215	ENST00000574680	INE1	O15225	51 aa		1.77	□□□□□ -2.13
PKMYT1-215	ENST00000574680	KRTAP21-1	Q3LI58	79 aa		1.69	□□□□□ -2.14
PKMYT1-215	ENST00000574680	MUC16	Q8WXI7	14507 aa		1.47	□□□□□ -2.17

Retrieved 78 of 20,778 RNA–protein pairs in 66.7 ms