RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 MT1GP13640 62 aa2.97□□□□□ -1.93
NPLOC4-211ENST00000573212 DMAC1Q96GE9 116 aa2.97□□□□□ -1.93
NPLOC4-211ENST00000573212 MT-ATP8P03928 68 aa2.96□□□□□ -1.94
NPLOC4-211ENST00000573212 HIST1H4AP62805 103 aaKnown RBP2.95□□□□□ -1.94
NPLOC4-211ENST00000573212 ATP5EP2Q5VTU8 51 aa2.95□□□□□ -1.94
NPLOC4-211ENST00000573212 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
NPLOC4-211ENST00000573212 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
NPLOC4-211ENST00000573212 A0A1B0GV90 55 aa2.93□□□□□ -1.94
NPLOC4-211ENST00000573212 KRTAP5-7Q6L8G8 165 aa2.93□□□□□ -1.94
NPLOC4-211ENST00000573212 LINC00643Q86TS7 51 aa2.92□□□□□ -1.94
NPLOC4-211ENST00000573212 TRAV7A0A075B6U4 112 aa2.9□□□□□ -1.95
NPLOC4-211ENST00000573212 H3BPC8 53 aa2.9□□□□□ -1.95
NPLOC4-211ENST00000573212 MT1MQ8N339 61 aa2.9□□□□□ -1.95
NPLOC4-211ENST00000573212 PP632Q6XCG6 107 aa2.89□□□□□ -1.95
NPLOC4-211ENST00000573212 KRTAP19-5Q3LI72 72 aa2.88□□□□□ -1.95
NPLOC4-211ENST00000573212 KRTAP13-4Q3LI77 160 aa2.86□□□□□ -1.95
NPLOC4-211ENST00000573212 MT1LQ93083 61 aa2.85□□□□□ -1.95
NPLOC4-211ENST00000573212 A0A0D9SG42 100 aa2.84□□□□□ -1.95
NPLOC4-211ENST00000573212 ACYP2P14621 99 aa2.84□□□□□ -1.95
NPLOC4-211ENST00000573212 KRTAP4-3Q9BYR4 195 aa2.84□□□□□ -1.95
NPLOC4-211ENST00000573212 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
NPLOC4-211ENST00000573212 SPTSSBQ8NFR3 76 aa2.82□□□□□ -1.96
NPLOC4-211ENST00000573212 SMIM20Q8N5G0 67 aa2.78□□□□□ -1.96
NPLOC4-211ENST00000573212 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
NPLOC4-211ENST00000573212 J3QR89 54 aa2.75□□□□□ -1.97
NPLOC4-211ENST00000573212 CHKB-CPT1BH3BT56 60 aa2.73□□□□□ -1.97
NPLOC4-211ENST00000573212 SCGB1A1P11684 91 aa2.73□□□□□ -1.97
NPLOC4-211ENST00000573212 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
NPLOC4-211ENST00000573212 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.98
NPLOC4-211ENST00000573212 C10orf95Q9H7T3 257 aa2.7□□□□□ -1.98
NPLOC4-211ENST00000573212 LCE3AQ5TA76 89 aa2.69□□□□□ -1.98
NPLOC4-211ENST00000573212 SNURFQ9Y675 71 aa2.69□□□□□ -1.98
NPLOC4-211ENST00000573212 KRTAP12-1P59990 96 aa2.68□□□□□ -1.98
NPLOC4-211ENST00000573212 KTN1-AS1Q86SY8 53 aa2.68□□□□□ -1.98
NPLOC4-211ENST00000573212 SYNE1Q8NF91 8797 aaKnown RBP2.68□□□□□ -1.98
NPLOC4-211ENST00000573212 K7ERU9 68 aa2.67□□□□□ -1.98
NPLOC4-211ENST00000573212 KRTAP12-4P60329 112 aa2.66□□□□□ -1.98
NPLOC4-211ENST00000573212 SPATA8Q6RVD6 105 aa2.65□□□□□ -1.99
NPLOC4-211ENST00000573212 TMEM258P61165 79 aa2.62□□□□□ -1.99
NPLOC4-211ENST00000573212 SERP2Q8N6R1 65 aa2.62□□□□□ -1.99
NPLOC4-211ENST00000573212 TNP1P09430 55 aa2.59□□□□□ -1.99
NPLOC4-211ENST00000573212 SERP1Q9Y6X1 66 aa2.59□□□□□ -1.99
NPLOC4-211ENST00000573212 KRTAP12-3P60328 96 aa2.58□□□□□ -2
NPLOC4-211ENST00000573212 COA5Q86WW8 74 aa2.57□□□□□ -2
NPLOC4-211ENST00000573212 H7BZZ5 65 aa2.55□□□□□ -2
NPLOC4-211ENST00000573212 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
NPLOC4-211ENST00000573212 KRTAP5-8O75690 187 aa2.53□□□□□ -2
NPLOC4-211ENST00000573212 COX7CP15954 63 aa2.53□□□□□ -2
NPLOC4-211ENST00000573212 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
NPLOC4-211ENST00000573212 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
NPLOC4-211ENST00000573212 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
NPLOC4-211ENST00000573212 Q1T7F1 81 aa2.47□□□□□ -2.01
NPLOC4-211ENST00000573212 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
NPLOC4-211ENST00000573212 RPS28P62857 69 aaKnown RBP2.43□□□□□ -2.02
NPLOC4-211ENST00000573212 KRTAP6-1Q3LI64 71 aa2.43□□□□□ -2.02
NPLOC4-211ENST00000573212 CCDC179H3BU77 68 aa2.42□□□□□ -2.02
NPLOC4-211ENST00000573212 MT1AP04731 61 aa2.42□□□□□ -2.02
NPLOC4-211ENST00000573212 A0A1B0GU69 56 aa2.4□□□□□ -2.03
NPLOC4-211ENST00000573212 ROMO1P60602 79 aa2.4□□□□□ -2.03
NPLOC4-211ENST00000573212 KRTAP6-2Q3LI66 62 aa2.35□□□□□ -2.03
NPLOC4-211ENST00000573212 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
NPLOC4-211ENST00000573212 LINC01558Q9Y6Z2 57 aa2.34□□□□□ -2.03
NPLOC4-211ENST00000573212 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
NPLOC4-211ENST00000573212 ATP5EP56381 51 aaPredicted RBP2.3□□□□□ -2.04
NPLOC4-211ENST00000573212 PRR15LQ9BU68 103 aa2.26□□□□□ -2.05
NPLOC4-211ENST00000573212 BRK1Q8WUW1 75 aa2.25□□□□□ -2.05
NPLOC4-211ENST00000573212 UQCR11O14957 56 aa2.23□□□□□ -2.05
NPLOC4-211ENST00000573212 MIR22HGQ0VDD5 57 aa2.19□□□□□ -2.06
NPLOC4-211ENST00000573212 INE1O15225 51 aa2.14□□□□□ -2.07
NPLOC4-211ENST00000573212 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
NPLOC4-211ENST00000573212 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
NPLOC4-211ENST00000573212 CDC42SE1Q9NRR8 79 aa2.14□□□□□ -2.07
NPLOC4-211ENST00000573212 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
NPLOC4-211ENST00000573212 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
NPLOC4-211ENST00000573212 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
NPLOC4-211ENST00000573212 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
NPLOC4-211ENST00000573212 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
NPLOC4-211ENST00000573212 PRM1P04553 51 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 201.5 ms