RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 KRTAP2-1Q9BYU5 128 aa4.6□□□□□ -1.67
NDE1-206ENST00000572967 PMAIP1Q13794 54 aa4.58□□□□□ -1.68
NDE1-206ENST00000572967 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
NDE1-206ENST00000572967 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
NDE1-206ENST00000572967 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
NDE1-206ENST00000572967 LCE3AQ5TA76 89 aa4.46□□□□□ -1.7
NDE1-206ENST00000572967 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
NDE1-206ENST00000572967 MT1EP04732 61 aa4.38□□□□□ -1.71
NDE1-206ENST00000572967 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
NDE1-206ENST00000572967 KRTAP19-5Q3LI72 72 aa4.35□□□□□ -1.71
NDE1-206ENST00000572967 KRTAP19-3Q7Z4W3 81 aa4.35□□□□□ -1.71
NDE1-206ENST00000572967 KRTAP12-3P60328 96 aa4.34□□□□□ -1.71
NDE1-206ENST00000572967 KTN1-AS1Q86SY8 53 aa4.33□□□□□ -1.72
NDE1-206ENST00000572967 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
NDE1-206ENST00000572967 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
NDE1-206ENST00000572967 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
NDE1-206ENST00000572967 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
NDE1-206ENST00000572967 MT1GP13640 62 aa4.19□□□□□ -1.74
NDE1-206ENST00000572967 MT1LQ93083 61 aa4.19□□□□□ -1.74
NDE1-206ENST00000572967 MT1MQ8N339 61 aa4.18□□□□□ -1.74
NDE1-206ENST00000572967 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
NDE1-206ENST00000572967 DSTQ03001 7570 aaKnown RBP4.14□□□□□ -1.75
NDE1-206ENST00000572967 MT4P47944 62 aa4.11□□□□□ -1.75
NDE1-206ENST00000572967 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
NDE1-206ENST00000572967 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
NDE1-206ENST00000572967 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
NDE1-206ENST00000572967 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
NDE1-206ENST00000572967 KRTAP4-7Q9BYR0 210 aa3.99□□□□□ -1.77
NDE1-206ENST00000572967 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
NDE1-206ENST00000572967 GPR98Q8WXG9 6306 aa3.95□□□□□ -1.78
NDE1-206ENST00000572967 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.79
NDE1-206ENST00000572967 KRTAP5-10Q6L8G5 202 aa3.87□□□□□ -1.79
NDE1-206ENST00000572967 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
NDE1-206ENST00000572967 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
NDE1-206ENST00000572967 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
NDE1-206ENST00000572967 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
NDE1-206ENST00000572967 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
NDE1-206ENST00000572967 SPRR5A0A1B0GTR4 108 aa3.76□□□□□ -1.81
NDE1-206ENST00000572967 KRTAP12-4P60329 112 aa3.72□□□□□ -1.81
NDE1-206ENST00000572967 KRTAP5-7Q6L8G8 165 aa3.72□□□□□ -1.81
NDE1-206ENST00000572967 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
NDE1-206ENST00000572967 LUZP6Q538Z0 58 aa3.67□□□□□ -1.82
NDE1-206ENST00000572967 MT1AP04731 61 aa3.6□□□□□ -1.83
NDE1-206ENST00000572967 H3BS24 57 aa3.57□□□□□ -1.84
NDE1-206ENST00000572967 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
NDE1-206ENST00000572967 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
NDE1-206ENST00000572967 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
NDE1-206ENST00000572967 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
NDE1-206ENST00000572967 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
NDE1-206ENST00000572967 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
NDE1-206ENST00000572967 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
NDE1-206ENST00000572967 MT3P25713 68 aa3.3□□□□□ -1.88
NDE1-206ENST00000572967 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
NDE1-206ENST00000572967 A0A0A0MQY5 61 aa3.21□□□□□ -1.9
NDE1-206ENST00000572967 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
NDE1-206ENST00000572967 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
NDE1-206ENST00000572967 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
NDE1-206ENST00000572967 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.92
NDE1-206ENST00000572967 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
NDE1-206ENST00000572967 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
NDE1-206ENST00000572967 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
NDE1-206ENST00000572967 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
NDE1-206ENST00000572967 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
NDE1-206ENST00000572967 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
NDE1-206ENST00000572967 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.95
NDE1-206ENST00000572967 INE1O15225 51 aa2.79□□□□□ -1.96
NDE1-206ENST00000572967 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
NDE1-206ENST00000572967 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
NDE1-206ENST00000572967 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
NDE1-206ENST00000572967 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
NDE1-206ENST00000572967 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
NDE1-206ENST00000572967 PRM1P04553 51 aa2.38□□□□□ -2.03
NDE1-206ENST00000572967 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
NDE1-206ENST00000572967 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
NDE1-206ENST00000572967 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
NDE1-206ENST00000572967 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
NDE1-206ENST00000572967 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
NDE1-206ENST00000572967 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 205.3 ms